Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346666
Identifier: 29346666
GI number: 29346666
Start: 1561738
End: 1562019
Strand: Reverse
Name: 29346666
Synonym: BT_1256
Alternate gene names: NA
Gene position: 1562019-1561738 (Counterclockwise)
Preceding gene: 29346668
Following gene: 29346665
Centisome position: 24.95
GC content: 39.36
Gene sequence:
>282_bases ATGAATGAAGTAAAGAAACGGTTACCATTGCAATGTCCATCCTGTGATGCTCCATTGAAAGTAGGACGGTTGTTTTGTGA AGAATGCAATACGGAAGTTTGTGGCAATTTTGAATTGCCTTTACTGGCGCGCCTGTCGGAGAAAGAGCAGCAATTTGTTC TTGATTTTGTAAAGTCAAGCGGCAGTTTGAAAGATATGGCGAAGAACATAGGAGTCAGCTACCCTACAGTTCGAAATATG TTGGACGATATAATAGATAAACTAACTAAAATGGATATGTGA
Upstream 100 bases:
>100_bases TCAATAATGAATAAAATTAAATTCTATATTAATATTATTGATGTGATCGTTTGTTTTTATTCGAATTTATCTCTACTTTT GCATCATAAATGAAGATGAT
Downstream 100 bases:
>100_bases TGAAAAACAAAGTAAAATTAATAGTGAATCCGTTTATTCGGATTGCAGGTGGTCAAGCGTTGATATGGGGCTTTCTGGGC TTAATAGTATCTACCTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MNEVKKRLPLQCPSCDAPLKVGRLFCEECNTEVCGNFELPLLARLSEKEQQFVLDFVKSSGSLKDMAKNIGVSYPTVRNM LDDIIDKLTKMDM
Sequences:
>Translated_93_residues MNEVKKRLPLQCPSCDAPLKVGRLFCEECNTEVCGNFELPLLARLSEKEQQFVLDFVKSSGSLKDMAKNIGVSYPTVRNM LDDIIDKLTKMDM >Mature_93_residues MNEVKKRLPLQCPSCDAPLKVGRLFCEECNTEVCGNFELPLLARLSEKEQQFVLDFVKSSGSLKDMAKNIGVSYPTVRNM LDDIIDKLTKMDM
Specific function: Unknown
COG id: COG3877
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10528; Mature: 10528
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVKKRLPLQCPSCDAPLKVGRLFCEECNTEVCGNFELPLLARLSEKEQQFVLDFVKSS CCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC GSLKDMAKNIGVSYPTVRNMLDDIIDKLTKMDM CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNEVKKRLPLQCPSCDAPLKVGRLFCEECNTEVCGNFELPLLARLSEKEQQFVLDFVKSS CCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC GSLKDMAKNIGVSYPTVRNMLDDIIDKLTKMDM CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA