Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346665
Identifier: 29346665
GI number: 29346665
Start: 1561154
End: 1561738
Strand: Reverse
Name: 29346665
Synonym: BT_1255
Alternate gene names: NA
Gene position: 1561738-1561154 (Counterclockwise)
Preceding gene: 29346666
Following gene: 29346661
Centisome position: 24.95
GC content: 42.56
Gene sequence:
>585_bases ATGAAAAACAAAGTAAAATTAATAGTGAATCCGTTTATTCGGATTGCAGGTGGTCAAGCGTTGATATGGGGCTTTCTGGG CTTAATAGTATCTACCTTATTGTGTTGGATATCGGGTTATCATTATCATGGTTTGCTTCATTTTGGACCGGCCCCCAATC CGGCTTGGTGGTGTTATCTGGCGGAACATCTGATTGTGTGGCTGATTCCTGCACTGCTCTTTTATCTGGGAGGTCTTTTT CTGTCTCATTCCCGCATTCGTGTGATAGATGTACTGGGTACTGTTTTGTTTGCTCAGCTGCCGTTGCTTGGAATGAATCT GATCAGCCTGTTGCCGGCCATGCGGATGATGTCACAAATGAACATGAATATGTCTCCCGAAGAAATGCTGGCACAGCCTT ATTTTATCCTGGCAATGATTCTTACACTGTTGGGATTGCCGTTTCTGATACTTACTTTGATTTGGATGTTTAATGCCTTG AAAGTGTCTTGTAACTTGAAACAATGGAAGTTATGGACAGTCGCACTTATAGGAATTATTGGTGGTGATGTCTTGTGCCG GTTCCTGATAGGATGGTTGTATTAA
Upstream 100 bases:
>100_bases GCAGTTTGAAAGATATGGCGAAGAACATAGGAGTCAGCTACCCTACAGTTCGAAATATGTTGGACGATATAATAGATAAA CTAACTAAAATGGATATGTG
Downstream 100 bases:
>100_bases CGGCTTAAATATAGTGACACTATCCCGTCACGATAGTGTCACTATGTCTCTGTGATAGTGTCACTATAACGAGCGGATAG TGACACTATTTTCAATCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKNKVKLIVNPFIRIAGGQALIWGFLGLIVSTLLCWISGYHYHGLLHFGPAPNPAWWCYLAEHLIVWLIPALLFYLGGLF LSHSRIRVIDVLGTVLFAQLPLLGMNLISLLPAMRMMSQMNMNMSPEEMLAQPYFILAMILTLLGLPFLILTLIWMFNAL KVSCNLKQWKLWTVALIGIIGGDVLCRFLIGWLY
Sequences:
>Translated_194_residues MKNKVKLIVNPFIRIAGGQALIWGFLGLIVSTLLCWISGYHYHGLLHFGPAPNPAWWCYLAEHLIVWLIPALLFYLGGLF LSHSRIRVIDVLGTVLFAQLPLLGMNLISLLPAMRMMSQMNMNMSPEEMLAQPYFILAMILTLLGLPFLILTLIWMFNAL KVSCNLKQWKLWTVALIGIIGGDVLCRFLIGWLY >Mature_194_residues MKNKVKLIVNPFIRIAGGQALIWGFLGLIVSTLLCWISGYHYHGLLHFGPAPNPAWWCYLAEHLIVWLIPALLFYLGGLF LSHSRIRVIDVLGTVLFAQLPLLGMNLISLLPAMRMMSQMNMNMSPEEMLAQPYFILAMILTLLGLPFLILTLIWMFNAL KVSCNLKQWKLWTVALIGIIGGDVLCRFLIGWLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22014; Mature: 22014
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKVKLIVNPFIRIAGGQALIWGFLGLIVSTLLCWISGYHYHGLLHFGPAPNPAWWCYL CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCHHHHHHH AEHLIVWLIPALLFYLGGLFLSHSRIRVIDVLGTVLFAQLPLLGMNLISLLPAMRMMSQM HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NMNMSPEEMLAQPYFILAMILTLLGLPFLILTLIWMFNALKVSCNLKQWKLWTVALIGII CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GGDVLCRFLIGWLY HHHHHHHHHHHHHC >Mature Secondary Structure MKNKVKLIVNPFIRIAGGQALIWGFLGLIVSTLLCWISGYHYHGLLHFGPAPNPAWWCYL CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCHHHHHHH AEHLIVWLIPALLFYLGGLFLSHSRIRVIDVLGTVLFAQLPLLGMNLISLLPAMRMMSQM HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NMNMSPEEMLAQPYFILAMILTLLGLPFLILTLIWMFNALKVSCNLKQWKLWTVALIGII CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GGDVLCRFLIGWLY HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA