Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346583
Identifier: 29346583
GI number: 29346583
Start: 1461856
End: 1462842
Strand: Reverse
Name: 29346583
Synonym: BT_1173
Alternate gene names: NA
Gene position: 1462842-1461856 (Counterclockwise)
Preceding gene: 29346595
Following gene: 29346582
Centisome position: 23.37
GC content: 49.65
Gene sequence:
>987_bases ATGAAGAAAGATCAGTATTTCAATTTAGAGGTAAATTTTTTGAGTAATGACAATATTGTCAGGATGATGATGGAACTTGA CGCTGCGCAATCGCTCGGAATCTATATGATGCTTCTTACGCATCTGCGCAAAGCGGACAATTATGAAGCGTCCTGTTGTC CGCTTTGTATGGGGGCTTTCGCACGAATGTATGATTTGGATGCCGGTGTGTTGCAAAGGGTTCTCCGTGAGTTCGACCTT TTTGTGCTCGACGAAGAACGGCAAATGTTCCGGTCGCCTTATCTGGACAGGGTGATGGCGAGGCTCGAAGAAAGACGGAT GATTAATGTGGCGAACGGCAAAAAAGGAGGTCGTCCGAAACGCATGGAGAGCACGCCGGAAACACCGATGGATAAAGGCG AAAAACCGAATCAAAACCAGAAGAGTAGAGAAGAGGAGAGAAGAGTTACTACTGTTGTCAAAGACAACAACAGTAGTAAC GAAGAAAAGACAGAGAAAGAAAATTCTGCCGCCGCTTCTGACAGACTTCAGATCGTTTCTCCACCGGAGGATAGGGGACA GTTGCCCCTACAGCCGGTTCTTCCGTGGGAGATGCTGGTGGATCAGATGGCCGAATCGGAAAGTTACATGGAGTCGATGG CTATGCACTCCTGTATGGGCAAACTTTTCGTGGAGCGGCAGGAGGAGGTGATCGCTGCTTTTAAAGAGCATATCCGACGC TTTGGCAGGGAAGATGGCTTGCTGTTTTTGAGGGATGTGAAATTGTATTTCGGCAATTACCTCTCTCCGGGCGGACGTCC GGCTCAGGAGCTGAAGAAAAGGCTGCTCGGCAGTTGCCGGCAATCGGCTGAGGAAGAACTGTATCGCTTTGAACAACTCA TTGGCGGGCAACGGACGTATCTTGGGCATCCGATTCCGAAGGATGCGCCTCCAAGACCGGACAGGTCTGCCGTGTGGGAT GAAGTGCATTGGAAGTGGGGAAATTAG
Upstream 100 bases:
>100_bases ACATCGTTTGCAGTTCTGCAAGTAGTTTTTCGAAAAAGTATTTAGACCTTTGCAGAGCGAATTCGGGATGTTCTGAATCA CAGTCATTTAATTGTAAGAT
Downstream 100 bases:
>100_bases CTCCGGATTTCTCTGACATCCGGCTACGTGAGCGTTGCCTTTCAGCTCAATGTTCGTTCATTCTCGGCTCGGTGCTCATT CATGCTCAGCTCGGTGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MKKDQYFNLEVNFLSNDNIVRMMMELDAAQSLGIYMMLLTHLRKADNYEASCCPLCMGAFARMYDLDAGVLQRVLREFDL FVLDEERQMFRSPYLDRVMARLEERRMINVANGKKGGRPKRMESTPETPMDKGEKPNQNQKSREEERRVTTVVKDNNSSN EEKTEKENSAAASDRLQIVSPPEDRGQLPLQPVLPWEMLVDQMAESESYMESMAMHSCMGKLFVERQEEVIAAFKEHIRR FGREDGLLFLRDVKLYFGNYLSPGGRPAQELKKRLLGSCRQSAEEELYRFEQLIGGQRTYLGHPIPKDAPPRPDRSAVWD EVHWKWGN
Sequences:
>Translated_328_residues MKKDQYFNLEVNFLSNDNIVRMMMELDAAQSLGIYMMLLTHLRKADNYEASCCPLCMGAFARMYDLDAGVLQRVLREFDL FVLDEERQMFRSPYLDRVMARLEERRMINVANGKKGGRPKRMESTPETPMDKGEKPNQNQKSREEERRVTTVVKDNNSSN EEKTEKENSAAASDRLQIVSPPEDRGQLPLQPVLPWEMLVDQMAESESYMESMAMHSCMGKLFVERQEEVIAAFKEHIRR FGREDGLLFLRDVKLYFGNYLSPGGRPAQELKKRLLGSCRQSAEEELYRFEQLIGGQRTYLGHPIPKDAPPRPDRSAVWD EVHWKWGN >Mature_328_residues MKKDQYFNLEVNFLSNDNIVRMMMELDAAQSLGIYMMLLTHLRKADNYEASCCPLCMGAFARMYDLDAGVLQRVLREFDL FVLDEERQMFRSPYLDRVMARLEERRMINVANGKKGGRPKRMESTPETPMDKGEKPNQNQKSREEERRVTTVVKDNNSSN EEKTEKENSAAASDRLQIVSPPEDRGQLPLQPVLPWEMLVDQMAESESYMESMAMHSCMGKLFVERQEEVIAAFKEHIRR FGREDGLLFLRDVKLYFGNYLSPGGRPAQELKKRLLGSCRQSAEEELYRFEQLIGGQRTYLGHPIPKDAPPRPDRSAVWD EVHWKWGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38113; Mature: 38113
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDQYFNLEVNFLSNDNIVRMMMELDAAQSLGIYMMLLTHLRKADNYEASCCPLCMGAF CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ARMYDLDAGVLQRVLREFDLFVLDEERQMFRSPYLDRVMARLEERRMINVANGKKGGRPK HHHHHCCHHHHHHHHHHHCCEEECHHHHHHHCHHHHHHHHHHHHHHEEECCCCCCCCCCC RMESTPETPMDKGEKPNQNQKSREEERRVTTVVKDNNSSNEEKTEKENSAAASDRLQIVS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCEEEEC PPEDRGQLPLQPVLPWEMLVDQMAESESYMESMAMHSCMGKLFVERQEEVIAAFKEHIRR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGREDGLLFLRDVKLYFGNYLSPGGRPAQELKKRLLGSCRQSAEEELYRFEQLIGGQRTY HCCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LGHPIPKDAPPRPDRSAVWDEVHWKWGN CCCCCCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MKKDQYFNLEVNFLSNDNIVRMMMELDAAQSLGIYMMLLTHLRKADNYEASCCPLCMGAF CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ARMYDLDAGVLQRVLREFDLFVLDEERQMFRSPYLDRVMARLEERRMINVANGKKGGRPK HHHHHCCHHHHHHHHHHHCCEEECHHHHHHHCHHHHHHHHHHHHHHEEECCCCCCCCCCC RMESTPETPMDKGEKPNQNQKSREEERRVTTVVKDNNSSNEEKTEKENSAAASDRLQIVS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCEEEEC PPEDRGQLPLQPVLPWEMLVDQMAESESYMESMAMHSCMGKLFVERQEEVIAAFKEHIRR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGREDGLLFLRDVKLYFGNYLSPGGRPAQELKKRLLGSCRQSAEEELYRFEQLIGGQRTY HCCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LGHPIPKDAPPRPDRSAVWDEVHWKWGN CCCCCCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA