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The map label for this gene is 29346582

Identifier: 29346582

GI number: 29346582

Start: 1459791

End: 1461590

Strand: Reverse

Name: 29346582

Synonym: BT_1172

Alternate gene names: NA

Gene position: 1461590-1459791 (Counterclockwise)

Preceding gene: 29346583

Following gene: 29346581

Centisome position: 23.35

GC content: 55.28

Gene sequence:

>1800_bases
ATGAGAAATTTTGCTAATTATCATGTCGATGTCCGCAGGCATACCAGCGGTGTCGTTAAAACCATTTGCGAGCAATGCCT
CCCGACGAGGCACAACAAGCGTGACCGTTCGCTGCGGGTCAATATCGACACAGGACATTGCCATTGCTACCATTGCGGAG
CCGACTTCTACGTCCCCGACGATGCCGAAGAGCGTGCGAAAGCCGAGCGACAGGCTGCCCGTAAACGTCGTGCGGCATCT
GCCGTTCCCCAGCATTTCCACCGTCCGGTGTTCGACGCTTCGAAGACGACGCTTTCCGAAGCTACGGAGCGTTGGCTGGT
AGAGACGCGTTGCATTCCGCAGTCCGTCATCGCCGGTCTGCGCATCACGGAGCAGGAAGAGTTCATGTCGCAATCCGGCA
CGAAAGAGCGGTGCGTCTGTTTCAACTATTTTGAGGACGGGAAACTCGTCAACACCAAGTTCCGCAGCGGTGCCAAAAAT
TTCAAAATGGTGCAGGGAGCCGAACTGATTCCCTACAATATCGATTCCGTGCTGGGACAGGACACCTGCATCATCCACGA
AGGCGAACTGGATGCCGCGTCCTCCCTTGCCACCGGATTCAAAAGCGTGATCTCCGTACCTGCCGGAGCTAACGCGAACC
TTTCGTGGCTCGACCGCTTCATGGAGTCGCACTTCGAGAATCTGAAAGACATCATCATAGCCGTTGACACCGACTCTGCC
GGGCTTAAACTGCGTGACGAACTGGTCAACCGTCTGGGTGCCGAACGCTGCCGTGTGGCCGTCTACGGACCGGGGTGTAA
GGATGCCAATGAACATCTTGTCAAATATGGGATCGACAGCCTTCGCATCGCCATCGAGCAGGCGGAAGAAATCCCTCTTG
AAGGCATCTTCACCGCCGCCGATCTGCACGAAGACCTGCGGGCATTGTTCGACAACGGCTTCGGTCCCGGAGCGGAGACG
GGCTGGGAGGAGATGGATAAGATTTGTACGTACGAACGTAGGCGGCTGGTCATCGTTACGGGCATACCGGGGGCCGGAAA
ATCGGAATGGCTGGACGAACTGGTGTTGCGCCTCTGTATGCGCCATCAGTGGAAGATAGCGTTTTTCAGTCCGGAGAATA
ATCCTATCGTCTACCATCTCCGCAAGTTGATCGAGAAACTGACCGGACGCCGTTTTCAAAACGGTTGCGGCATGACGGAA
GGACTTCTGCTCCGTTCGGAAGAGTTTCTTGCCGAAAACGTCTGTCACATCGCCCTCAAAGGCAGCGCCACTCCGGAACG
GGTGCTTGCCAAAGCCCGTGAACTTGTCCTGCGTCGGGGATGCCGCATCTTCGTCTTCGACCCGGTCAACCGTTTTGAGC
ATACCCCAGCACCGGGGCAATCGGAAACGCAGTATCTTTCCAATTTTCTGAATCTGTTTACGGAGTTTGCCACGCAATAT
AACTGTCTGGTGATTCTTGTGGCGCACCCCCGAAAGATGAACCGCAATCCGGTGACAAACCATACTCCGCGTCCGGATAT
GTACGACGTAAACGGGTCTGCCGATTTCTTCAACAAGGCGGATTACGGCTTGGTAGTGGAGCGTGACAAGGAGGTCGGAG
TGACACGTGTCTATGTCGAAAAAGTGAAGTTCAAACATCTCGGAACGGGTGGTGTGGCTACTTTTGTCTACGATCCCGTC
AGCGGACGTTACCTCCCCTGCGAAGAGTCCCAAGACCCGTCCGTCCCACCGGAACAACGGGTCAGAAACACTGTCAATGA
TAGCTCGTGCTGGTTGCCGGAGAAGGAGCTGTTTGAATAG

Upstream 100 bases:

>100_bases
ATTGATGCTTAGCTTTCTGTCTGCATTGGGAACTGATAGAAAAATTATTAATACAAACTTAAAATCTCCTTTTCGGAAGG
GAGGAATAGAAACAAGAAAT

Downstream 100 bases:

>100_bases
GTAATAGGTAATAAGTATTAGGTATTAAGTATTAAGTATTAGGTAATAAGTAATAGGTAATAATCGTAGTTGGTGAGGGT
GGTGGGTAACAGGTCACGGG

Product: DNA primase/helicase

Products: NA

Alternate protein names: TOPRIM Domain-Containing Protein; Phage Related Protein; Phage DNA Primase/Helicase; Prim Domain-Containing Protein; TOPRIM Domain Protein; DNA Primase

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MRNFANYHVDVRRHTSGVVKTICEQCLPTRHNKRDRSLRVNIDTGHCHCYHCGADFYVPDDAEERAKAERQAARKRRAAS
AVPQHFHRPVFDASKTTLSEATERWLVETRCIPQSVIAGLRITEQEEFMSQSGTKERCVCFNYFEDGKLVNTKFRSGAKN
FKMVQGAELIPYNIDSVLGQDTCIIHEGELDAASSLATGFKSVISVPAGANANLSWLDRFMESHFENLKDIIIAVDTDSA
GLKLRDELVNRLGAERCRVAVYGPGCKDANEHLVKYGIDSLRIAIEQAEEIPLEGIFTAADLHEDLRALFDNGFGPGAET
GWEEMDKICTYERRRLVIVTGIPGAGKSEWLDELVLRLCMRHQWKIAFFSPENNPIVYHLRKLIEKLTGRRFQNGCGMTE
GLLLRSEEFLAENVCHIALKGSATPERVLAKARELVLRRGCRIFVFDPVNRFEHTPAPGQSETQYLSNFLNLFTEFATQY
NCLVILVAHPRKMNRNPVTNHTPRPDMYDVNGSADFFNKADYGLVVERDKEVGVTRVYVEKVKFKHLGTGGVATFVYDPV
SGRYLPCEESQDPSVPPEQRVRNTVNDSSCWLPEKELFE

Sequences:

>Translated_599_residues
MRNFANYHVDVRRHTSGVVKTICEQCLPTRHNKRDRSLRVNIDTGHCHCYHCGADFYVPDDAEERAKAERQAARKRRAAS
AVPQHFHRPVFDASKTTLSEATERWLVETRCIPQSVIAGLRITEQEEFMSQSGTKERCVCFNYFEDGKLVNTKFRSGAKN
FKMVQGAELIPYNIDSVLGQDTCIIHEGELDAASSLATGFKSVISVPAGANANLSWLDRFMESHFENLKDIIIAVDTDSA
GLKLRDELVNRLGAERCRVAVYGPGCKDANEHLVKYGIDSLRIAIEQAEEIPLEGIFTAADLHEDLRALFDNGFGPGAET
GWEEMDKICTYERRRLVIVTGIPGAGKSEWLDELVLRLCMRHQWKIAFFSPENNPIVYHLRKLIEKLTGRRFQNGCGMTE
GLLLRSEEFLAENVCHIALKGSATPERVLAKARELVLRRGCRIFVFDPVNRFEHTPAPGQSETQYLSNFLNLFTEFATQY
NCLVILVAHPRKMNRNPVTNHTPRPDMYDVNGSADFFNKADYGLVVERDKEVGVTRVYVEKVKFKHLGTGGVATFVYDPV
SGRYLPCEESQDPSVPPEQRVRNTVNDSSCWLPEKELFE
>Mature_599_residues
MRNFANYHVDVRRHTSGVVKTICEQCLPTRHNKRDRSLRVNIDTGHCHCYHCGADFYVPDDAEERAKAERQAARKRRAAS
AVPQHFHRPVFDASKTTLSEATERWLVETRCIPQSVIAGLRITEQEEFMSQSGTKERCVCFNYFEDGKLVNTKFRSGAKN
FKMVQGAELIPYNIDSVLGQDTCIIHEGELDAASSLATGFKSVISVPAGANANLSWLDRFMESHFENLKDIIIAVDTDSA
GLKLRDELVNRLGAERCRVAVYGPGCKDANEHLVKYGIDSLRIAIEQAEEIPLEGIFTAADLHEDLRALFDNGFGPGAET
GWEEMDKICTYERRRLVIVTGIPGAGKSEWLDELVLRLCMRHQWKIAFFSPENNPIVYHLRKLIEKLTGRRFQNGCGMTE
GLLLRSEEFLAENVCHIALKGSATPERVLAKARELVLRRGCRIFVFDPVNRFEHTPAPGQSETQYLSNFLNLFTEFATQY
NCLVILVAHPRKMNRNPVTNHTPRPDMYDVNGSADFFNKADYGLVVERDKEVGVTRVYVEKVKFKHLGTGGVATFVYDPV
SGRYLPCEESQDPSVPPEQRVRNTVNDSSCWLPEKELFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67801; Mature: 67801

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNFANYHVDVRRHTSGVVKTICEQCLPTRHNKRDRSLRVNIDTGHCHCYHCGADFYVPD
CCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCC
DAEERAKAERQAARKRRAASAVPQHFHRPVFDASKTTLSEATERWLVETRCIPQSVIAGL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCC
RITEQEEFMSQSGTKERCVCFNYFEDGKLVNTKFRSGAKNFKMVQGAELIPYNIDSVLGQ
CCCCHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHCCCCCCEEECCCCCCCCCHHHHCCC
DTCIIHEGELDAASSLATGFKSVISVPAGANANLSWLDRFMESHFENLKDIIIAVDTDSA
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCC
GLKLRDELVNRLGAERCRVAVYGPGCKDANEHLVKYGIDSLRIAIEQAEEIPLEGIFTAA
CCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHH
DLHEDLRALFDNGFGPGAETGWEEMDKICTYERRRLVIVTGIPGAGKSEWLDELVLRLCM
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
RHQWKIAFFSPENNPIVYHLRKLIEKLTGRRFQNGCGMTEGLLLRSEEFLAENVCHIALK
CCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCHHHEECCHHHHHCCCEEEEEE
GSATPERVLAKARELVLRRGCRIFVFDPVNRFEHTPAPGQSETQYLSNFLNLFTEFATQY
CCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
NCLVILVAHPRKMNRNPVTNHTPRPDMYDVNGSADFFNKADYGLVVERDKEVGVTRVYVE
CEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHH
KVKFKHLGTGGVATFVYDPVSGRYLPCEESQDPSVPPEQRVRNTVNDSSCWLPEKELFE
HHHHHCCCCCCEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MRNFANYHVDVRRHTSGVVKTICEQCLPTRHNKRDRSLRVNIDTGHCHCYHCGADFYVPD
CCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCC
DAEERAKAERQAARKRRAASAVPQHFHRPVFDASKTTLSEATERWLVETRCIPQSVIAGL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCC
RITEQEEFMSQSGTKERCVCFNYFEDGKLVNTKFRSGAKNFKMVQGAELIPYNIDSVLGQ
CCCCHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHCCCCCCEEECCCCCCCCCHHHHCCC
DTCIIHEGELDAASSLATGFKSVISVPAGANANLSWLDRFMESHFENLKDIIIAVDTDSA
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCC
GLKLRDELVNRLGAERCRVAVYGPGCKDANEHLVKYGIDSLRIAIEQAEEIPLEGIFTAA
CCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHH
DLHEDLRALFDNGFGPGAETGWEEMDKICTYERRRLVIVTGIPGAGKSEWLDELVLRLCM
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
RHQWKIAFFSPENNPIVYHLRKLIEKLTGRRFQNGCGMTEGLLLRSEEFLAENVCHIALK
CCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCHHHEECCHHHHHCCCEEEEEE
GSATPERVLAKARELVLRRGCRIFVFDPVNRFEHTPAPGQSETQYLSNFLNLFTEFATQY
CCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
NCLVILVAHPRKMNRNPVTNHTPRPDMYDVNGSADFFNKADYGLVVERDKEVGVTRVYVE
CEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHH
KVKFKHLGTGGVATFVYDPVSGRYLPCEESQDPSVPPEQRVRNTVNDSSCWLPEKELFE
HHHHHCCCCCCEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA