| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yajO [H]
Identifier: 29346525
GI number: 29346525
Start: 1401639
End: 1402793
Strand: Reverse
Name: yajO [H]
Synonym: BT_1115
Alternate gene names: 29346525
Gene position: 1402793-1401639 (Counterclockwise)
Preceding gene: 29346526
Following gene: 29346524
Centisome position: 22.41
GC content: 51.08
Gene sequence:
>1155_bases ATGAGCCGCCGGAGATTCCTTAAAATGGCGGCATTGACAGGAGCTGCCATGTGTGTCGGGCCTACCTTGAACAAGGTAAC GGCAGCAGAACGGGTATGGATGGGGAAACAACAAGTTGCAAACAACATCCCTGCAGGCATGGCGGCGGTGCGCACTCGGC GAACATTGGGACACGGAAATACGGCATTCACTGTTTCTGCAATGGGATATGGCTGTATGGGCTTGAACCATAACCGCAGC CAGTACCCGAGCAGGGAAAAAGAAATCGCCCTGGTGCATGAAGCTGTTGAACGTGGGGTGACCCTTTTCGATACAGCCGA AAGCTACGGCTACCACATCAATGAAAAATTGGTCGGCGAAGCCTTGAAAGGATATACCGACCGGGTATTTGTGTCATCGA AGTTCGGACATAAGTTTGTAAACGGTGTGCAGATTAAAACCGAAGAGGACAGCACTCCGGCCAACATCCGCCGGGTTTGT GAAAACTCGTTGCGCAATCTCGGAGTTGAAACATTGGGCATGTTCTACCAGCACCGCATAGACCCGAACACACCGATTGA AGCGGTGGCTGAAACATGCAGCAAACTCATCAAGGAAGGTAAAATCCTGCATTGGGGCATGTGTGAAGTAAACGTTGATA CCATCCGCCGTGCGCACAAGATATGTCCGGTTACGGCAATCCAAAGCGAATATCACTTGATGCACCGCATGGTAGAGACG AACGGAGTGTTGGAGCTGTGCGAGGATTTGGGCATCGGTTTCGTTCCATACAGTCCGCTGAACCGTGGTTTTTTGGGCGG TATGATCAATGAATATACCAAGTTTGATGTTACCAACGACAACCGGCAGACCTTGCCACGCTTCCAGCCCGAAGCCATAC GCGCCAACTATCGTATTGTGGAAGTTCTTAACGCTTTCGGCCGTACAAGAGGCATTACCCCGGCACAGATAGCTTTGGCC TGGCTGATGAACAAGAAGCCTTTTATCGTGCCTATTCCGGGCACCACCAAACTCTCTCATCTAGAAGAGAACCTTCGTGC CTGCGACATCCGTTTCACGGCAGAAGAGATAGAAGAACTGGAAACAGCCGTAGCTGCCATTCCTGTGGTGGGTAGCCGCT ACGATGCCTTGCAGGAGTCTAAAATCCCAAAATAA
Upstream 100 bases:
>100_bases GCTTAGATGATATATATCAAAAAAAGTTTATCAATTCTGTCACGTTAACTTTGCAACAGAAATAATTTAAAGACTATCAA ATATGGATAAAGACAAGGAT
Downstream 100 bases:
>100_bases TCCGTGTATGAAGAAACAGATATTTTACATGACGTTCATCGCTTTACTGTCGGGCTGTAATTGTTACAAAGGGAATATTC TGCAAATAGAGGAACAAGGC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSRRRFLKMAALTGAAMCVGPTLNKVTAAERVWMGKQQVANNIPAGMAAVRTRRTLGHGNTAFTVSAMGYGCMGLNHNRS QYPSREKEIALVHEAVERGVTLFDTAESYGYHINEKLVGEALKGYTDRVFVSSKFGHKFVNGVQIKTEEDSTPANIRRVC ENSLRNLGVETLGMFYQHRIDPNTPIEAVAETCSKLIKEGKILHWGMCEVNVDTIRRAHKICPVTAIQSEYHLMHRMVET NGVLELCEDLGIGFVPYSPLNRGFLGGMINEYTKFDVTNDNRQTLPRFQPEAIRANYRIVEVLNAFGRTRGITPAQIALA WLMNKKPFIVPIPGTTKLSHLEENLRACDIRFTAEEIEELETAVAAIPVVGSRYDALQESKIPK
Sequences:
>Translated_384_residues MSRRRFLKMAALTGAAMCVGPTLNKVTAAERVWMGKQQVANNIPAGMAAVRTRRTLGHGNTAFTVSAMGYGCMGLNHNRS QYPSREKEIALVHEAVERGVTLFDTAESYGYHINEKLVGEALKGYTDRVFVSSKFGHKFVNGVQIKTEEDSTPANIRRVC ENSLRNLGVETLGMFYQHRIDPNTPIEAVAETCSKLIKEGKILHWGMCEVNVDTIRRAHKICPVTAIQSEYHLMHRMVET NGVLELCEDLGIGFVPYSPLNRGFLGGMINEYTKFDVTNDNRQTLPRFQPEAIRANYRIVEVLNAFGRTRGITPAQIALA WLMNKKPFIVPIPGTTKLSHLEENLRACDIRFTAEEIEELETAVAAIPVVGSRYDALQESKIPK >Mature_383_residues SRRRFLKMAALTGAAMCVGPTLNKVTAAERVWMGKQQVANNIPAGMAAVRTRRTLGHGNTAFTVSAMGYGCMGLNHNRSQ YPSREKEIALVHEAVERGVTLFDTAESYGYHINEKLVGEALKGYTDRVFVSSKFGHKFVNGVQIKTEEDSTPANIRRVCE NSLRNLGVETLGMFYQHRIDPNTPIEAVAETCSKLIKEGKILHWGMCEVNVDTIRRAHKICPVTAIQSEYHLMHRMVETN GVLELCEDLGIGFVPYSPLNRGFLGGMINEYTKFDVTNDNRQTLPRFQPEAIRANYRIVEVLNAFGRTRGITPAQIALAW LMNKKPFIVPIPGTTKLSHLEENLRACDIRFTAEEIEELETAVAAIPVVGSRYDALQESKIPK
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436962, Length=342, Percent_Identity=25.1461988304094, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI27436964, Length=328, Percent_Identity=25.3048780487805, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI27436966, Length=328, Percent_Identity=25.3048780487805, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI27436969, Length=331, Percent_Identity=25.0755287009063, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI4504825, Length=331, Percent_Identity=25.0755287009063, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI27436971, Length=348, Percent_Identity=25.2873563218391, Blast_Score=88, Evalue=1e-17, Organism=Escherichia coli, GI87081735, Length=325, Percent_Identity=32.3076923076923, Blast_Score=151, Evalue=9e-38, Organism=Escherichia coli, GI1789375, Length=311, Percent_Identity=25.7234726688103, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1787674, Length=306, Percent_Identity=27.1241830065359, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1788070, Length=308, Percent_Identity=28.8961038961039, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1788081, Length=314, Percent_Identity=26.4331210191083, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6325384, Length=340, Percent_Identity=28.2352941176471, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6323998, Length=296, Percent_Identity=23.9864864864865, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6319958, Length=296, Percent_Identity=22.6351351351351, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6325169, Length=333, Percent_Identity=20.7207207207207, Blast_Score=73, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6322615, Length=212, Percent_Identity=23.5849056603774, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640980, Length=347, Percent_Identity=23.342939481268, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45549126, Length=347, Percent_Identity=23.342939481268, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 42884; Mature: 42753
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRRFLKMAALTGAAMCVGPTLNKVTAAERVWMGKQQVANNIPAGMAAVRTRRTLGHGN CCHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCC TAFTVSAMGYGCMGLNHNRSQYPSREKEIALVHEAVERGVTLFDTAESYGYHINEKLVGE CEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHCCCCCCHHHHHH ALKGYTDRVFVSSKFGHKFVNGVQIKTEEDSTPANIRRVCENSLRNLGVETLGMFYQHRI HHHCCCCEEEEECHHCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC DPNTPIEAVAETCSKLIKEGKILHWGMCEVNVDTIRRAHKICPVTAIQSEYHLMHRMVET CCCCCHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NGVLELCEDLGIGFVPYSPLNRGFLGGMINEYTKFDVTNDNRQTLPRFQPEAIRANYRIV CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHCCCCCCCHHHHCCHHHH EVLNAFGRTRGITPAQIALAWLMNKKPFIVPIPGTTKLSHLEENLRACDIRFTAEEIEEL HHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEEEEECHHHHHHH ETAVAAIPVVGSRYDALQESKIPK HHHHHHHCCCCCHHHHHHHCCCCC >Mature Secondary Structure SRRRFLKMAALTGAAMCVGPTLNKVTAAERVWMGKQQVANNIPAGMAAVRTRRTLGHGN CHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCC TAFTVSAMGYGCMGLNHNRSQYPSREKEIALVHEAVERGVTLFDTAESYGYHINEKLVGE CEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHCCCCCCHHHHHH ALKGYTDRVFVSSKFGHKFVNGVQIKTEEDSTPANIRRVCENSLRNLGVETLGMFYQHRI HHHCCCCEEEEECHHCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC DPNTPIEAVAETCSKLIKEGKILHWGMCEVNVDTIRRAHKICPVTAIQSEYHLMHRMVET CCCCCHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NGVLELCEDLGIGFVPYSPLNRGFLGGMINEYTKFDVTNDNRQTLPRFQPEAIRANYRIV CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHCCCCCCCHHHHCCHHHH EVLNAFGRTRGITPAQIALAWLMNKKPFIVPIPGTTKLSHLEENLRACDIRFTAEEIEEL HHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEEEEECHHHHHHH ETAVAAIPVVGSRYDALQESKIPK HHHHHHHCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]