Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346526

Identifier: 29346526

GI number: 29346526

Start: 1402938

End: 1403495

Strand: Reverse

Name: 29346526

Synonym: BT_1116

Alternate gene names: NA

Gene position: 1403495-1402938 (Counterclockwise)

Preceding gene: 29346527

Following gene: 29346525

Centisome position: 22.42

GC content: 40.32

Gene sequence:

>558_bases
ATGGTAAGATTAATCAAAACAGAGACAGTCATAAGTGTACTGATGGGGCATTTTATAAAGAAATTATTGTTTATCTTGCT
GTTTGTCGGGGTACTGATTGCTCCGGCAAACGCACAAAACGAAAAGAATATGTATTCGTACAAGAAAATTGGCAACAAGT
ATATTGTCAGCATTAACAATCATACTGAAATTGTGAAAGCCCTGAATGCTTTCTGCAAGGAGAAAGGAATTCTGTCGGGT
TCTATCAACGGGATTGGTGCTATCGGAGAGCTGACCCTCCGTTTCTTCAATCCCAAGACAAAAGCATATGATGATAAGAC
ATTCCGGGAGCAAATGGAAATATCCAACCTTACAGGGAATATATCATCTATGAATGAGCAGGTATATCTTCATTTGCATA
TAACCGTCGGCAGGAGCGACTATTCCGCTTTAGCCGGACATCTACTTTCCGCAATACAGAATGGTGCAGGGGAGTTCGTG
GTGGAAGATTATAGCGAGCGGATAAGTCGCACATATAATCCAGATTTAGGCCTGAATATATACGATTTTGAAAGATAG

Upstream 100 bases:

>100_bases
TAAGAAGGAAGAGCCAACTTTGAACAAGGTAACGTTCGTAAACGGTGTGCAGATTAAAAACAAAAGTGGAAAGCACTGAT
GTGGGATAATTTTATCTATT

Downstream 100 bases:

>100_bases
TTGCCTATAAATATCGCTTGGAATACAGGATAATACATCATTCAGCTTAGATGATATATATCAAAAAAAGTTTATCAATT
CTGTCACGTTAACTTTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MVRLIKTETVISVLMGHFIKKLLFILLFVGVLIAPANAQNEKNMYSYKKIGNKYIVSINNHTEIVKALNAFCKEKGILSG
SINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGNISSMNEQVYLHLHITVGRSDYSALAGHLLSAIQNGAGEFV
VEDYSERISRTYNPDLGLNIYDFER

Sequences:

>Translated_185_residues
MVRLIKTETVISVLMGHFIKKLLFILLFVGVLIAPANAQNEKNMYSYKKIGNKYIVSINNHTEIVKALNAFCKEKGILSG
SINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGNISSMNEQVYLHLHITVGRSDYSALAGHLLSAIQNGAGEFV
VEDYSERISRTYNPDLGLNIYDFER
>Mature_185_residues
MVRLIKTETVISVLMGHFIKKLLFILLFVGVLIAPANAQNEKNMYSYKKIGNKYIVSINNHTEIVKALNAFCKEKGILSG
SINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGNISSMNEQVYLHLHITVGRSDYSALAGHLLSAIQNGAGEFV
VEDYSERISRTYNPDLGLNIYDFER

Specific function: Unknown

COG id: COG1661

COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20784; Mature: 20784

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLIKTETVISVLMGHFIKKLLFILLFVGVLIAPANAQNEKNMYSYKKIGNKYIVSINN
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECC
HTEIVKALNAFCKEKGILSGSINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGN
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCC
ISSMNEQVYLHLHITVGRSDYSALAGHLLSAIQNGAGEFVVEDYSERISRTYNPDLGLNI
HHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEE
YDFER
ECCCC
>Mature Secondary Structure
MVRLIKTETVISVLMGHFIKKLLFILLFVGVLIAPANAQNEKNMYSYKKIGNKYIVSINN
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECC
HTEIVKALNAFCKEKGILSGSINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGN
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCC
ISSMNEQVYLHLHITVGRSDYSALAGHLLSAIQNGAGEFVVEDYSERISRTYNPDLGLNI
HHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEE
YDFER
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA