| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346526
Identifier: 29346526
GI number: 29346526
Start: 1402938
End: 1403495
Strand: Reverse
Name: 29346526
Synonym: BT_1116
Alternate gene names: NA
Gene position: 1403495-1402938 (Counterclockwise)
Preceding gene: 29346527
Following gene: 29346525
Centisome position: 22.42
GC content: 40.32
Gene sequence:
>558_bases ATGGTAAGATTAATCAAAACAGAGACAGTCATAAGTGTACTGATGGGGCATTTTATAAAGAAATTATTGTTTATCTTGCT GTTTGTCGGGGTACTGATTGCTCCGGCAAACGCACAAAACGAAAAGAATATGTATTCGTACAAGAAAATTGGCAACAAGT ATATTGTCAGCATTAACAATCATACTGAAATTGTGAAAGCCCTGAATGCTTTCTGCAAGGAGAAAGGAATTCTGTCGGGT TCTATCAACGGGATTGGTGCTATCGGAGAGCTGACCCTCCGTTTCTTCAATCCCAAGACAAAAGCATATGATGATAAGAC ATTCCGGGAGCAAATGGAAATATCCAACCTTACAGGGAATATATCATCTATGAATGAGCAGGTATATCTTCATTTGCATA TAACCGTCGGCAGGAGCGACTATTCCGCTTTAGCCGGACATCTACTTTCCGCAATACAGAATGGTGCAGGGGAGTTCGTG GTGGAAGATTATAGCGAGCGGATAAGTCGCACATATAATCCAGATTTAGGCCTGAATATATACGATTTTGAAAGATAG
Upstream 100 bases:
>100_bases TAAGAAGGAAGAGCCAACTTTGAACAAGGTAACGTTCGTAAACGGTGTGCAGATTAAAAACAAAAGTGGAAAGCACTGAT GTGGGATAATTTTATCTATT
Downstream 100 bases:
>100_bases TTGCCTATAAATATCGCTTGGAATACAGGATAATACATCATTCAGCTTAGATGATATATATCAAAAAAAGTTTATCAATT CTGTCACGTTAACTTTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MVRLIKTETVISVLMGHFIKKLLFILLFVGVLIAPANAQNEKNMYSYKKIGNKYIVSINNHTEIVKALNAFCKEKGILSG SINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGNISSMNEQVYLHLHITVGRSDYSALAGHLLSAIQNGAGEFV VEDYSERISRTYNPDLGLNIYDFER
Sequences:
>Translated_185_residues MVRLIKTETVISVLMGHFIKKLLFILLFVGVLIAPANAQNEKNMYSYKKIGNKYIVSINNHTEIVKALNAFCKEKGILSG SINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGNISSMNEQVYLHLHITVGRSDYSALAGHLLSAIQNGAGEFV VEDYSERISRTYNPDLGLNIYDFER >Mature_185_residues MVRLIKTETVISVLMGHFIKKLLFILLFVGVLIAPANAQNEKNMYSYKKIGNKYIVSINNHTEIVKALNAFCKEKGILSG SINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGNISSMNEQVYLHLHITVGRSDYSALAGHLLSAIQNGAGEFV VEDYSERISRTYNPDLGLNIYDFER
Specific function: Unknown
COG id: COG1661
COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20784; Mature: 20784
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLIKTETVISVLMGHFIKKLLFILLFVGVLIAPANAQNEKNMYSYKKIGNKYIVSINN CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECC HTEIVKALNAFCKEKGILSGSINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGN HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCC ISSMNEQVYLHLHITVGRSDYSALAGHLLSAIQNGAGEFVVEDYSERISRTYNPDLGLNI HHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEE YDFER ECCCC >Mature Secondary Structure MVRLIKTETVISVLMGHFIKKLLFILLFVGVLIAPANAQNEKNMYSYKKIGNKYIVSINN CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECC HTEIVKALNAFCKEKGILSGSINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGN HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCC ISSMNEQVYLHLHITVGRSDYSALAGHLLSAIQNGAGEFVVEDYSERISRTYNPDLGLNI HHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEE YDFER ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA