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The map label for this gene is yvbG [H]

Identifier: 29346518

GI number: 29346518

Start: 1395973

End: 1396698

Strand: Reverse

Name: yvbG [H]

Synonym: BT_1108

Alternate gene names: 29346518

Gene position: 1396698-1395973 (Counterclockwise)

Preceding gene: 29346519

Following gene: 29346517

Centisome position: 22.31

GC content: 38.43

Gene sequence:

>726_bases
ATGCAAAATTTAATATTGCAGAATGCTATCTGGTATGTTTTTTGCGATATAATAATCGATAATAAACTATATGTCATCAT
GGATATATTTGTATATTTAACATTGTGTTTCACTTCGCTATTCACCTTGATGGACCCTCTTGGAGTGATGCCGGTATTCC
TGCAAATGACTGATGGAATGGATACGAAAGAACGCAGATATATCGCCTTGAAAGCATGTACCATTGCATTTATCATATTA
GTCCTTTTTACATTATCGGGCAGGTTTCTGTTTCATTTTTTCGGCATCTCAACAAACGGATTCCGGATTGTGGGAGGTAT
CATCATCTTTAAAATCGGATATGATATGTTGCAGGCACATTTTACCCATGTGAAACTGAATGAAACTGAACGAAAAGAAT
ATTCCAAAGATATAACCATCACACCTCTTGCCATTCCGATGTTATGCGGTCCGGGAGCGATTTCCAGTGGAATAACATTG
ATGGAAGATGCTTCGGAATATACTTTCAAAATAGTATTGCTTGGCGTAATCGCTTTGGTCTGCATTCTTTCCTTCTTTAT
TCTGTGCGCGTCCACCCAGCTTTTAAAAATCTTGGGAGAGACGGGAAACAATGTGATGATGAGACTGATGGGACTTATTC
TAATGGTGATCGCCGTGGAATGTTTTATCAGCGGGATACGTCCGGTATTAATTGAAATCTTGAAACAAGCCCATGCTTGT
TCTTAA

Upstream 100 bases:

>100_bases
ATATGTAAGTACGGCATTTATGGAATTGTTACGTATCCTCGCCAAGGAAAACGAACGGAAACTACCTTATTTTTGACGGT
ATGGATTTAAGATTGATGTT

Downstream 100 bases:

>100_bases
AGAAGAGAGATAATTTGGATTTATTATTAACATTAAAAGTTTGATTCATCATGACTGAAAAATTGCAAAATGCTCTGAAT
GAGCAAATCACAGCAGAATT

Product: putative integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MQNLILQNAIWYVFCDIIIDNKLYVIMDIFVYLTLCFTSLFTLMDPLGVMPVFLQMTDGMDTKERRYIALKACTIAFIIL
VLFTLSGRFLFHFFGISTNGFRIVGGIIIFKIGYDMLQAHFTHVKLNETERKEYSKDITITPLAIPMLCGPGAISSGITL
MEDASEYTFKIVLLGVIALVCILSFFILCASTQLLKILGETGNNVMMRLMGLILMVIAVECFISGIRPVLIEILKQAHAC
S

Sequences:

>Translated_241_residues
MQNLILQNAIWYVFCDIIIDNKLYVIMDIFVYLTLCFTSLFTLMDPLGVMPVFLQMTDGMDTKERRYIALKACTIAFIIL
VLFTLSGRFLFHFFGISTNGFRIVGGIIIFKIGYDMLQAHFTHVKLNETERKEYSKDITITPLAIPMLCGPGAISSGITL
MEDASEYTFKIVLLGVIALVCILSFFILCASTQLLKILGETGNNVMMRLMGLILMVIAVECFISGIRPVLIEILKQAHAC
S
>Mature_241_residues
MQNLILQNAIWYVFCDIIIDNKLYVIMDIFVYLTLCFTSLFTLMDPLGVMPVFLQMTDGMDTKERRYIALKACTIAFIIL
VLFTLSGRFLFHFFGISTNGFRIVGGIIIFKIGYDMLQAHFTHVKLNETERKEYSKDITITPLAIPMLCGPGAISSGITL
MEDASEYTFKIVLLGVIALVCILSFFILCASTQLLKILGETGNNVMMRLMGLILMVIAVECFISGIRPVLIEILKQAHAC
S

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=210, Percent_Identity=32.8571428571429, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1789842, Length=190, Percent_Identity=34.7368421052632, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1787809, Length=225, Percent_Identity=29.3333333333333, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 27053; Mature: 27053

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLILQNAIWYVFCDIIIDNKLYVIMDIFVYLTLCFTSLFTLMDPLGVMPVFLQMTDGM
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC
DTKERRYIALKACTIAFIILVLFTLSGRFLFHFFGISTNGFRIVGGIIIFKIGYDMLQAH
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
FTHVKLNETERKEYSKDITITPLAIPMLCGPGAISSGITLMEDASEYTFKIVLLGVIALV
HHHEEECHHHHHHHCCCCEECHHHHHHHCCCCCHHCCCHHHHCCHHHHHHHHHHHHHHHH
CILSFFILCASTQLLKILGETGNNVMMRLMGLILMVIAVECFISGIRPVLIEILKQAHAC
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
S
C
>Mature Secondary Structure
MQNLILQNAIWYVFCDIIIDNKLYVIMDIFVYLTLCFTSLFTLMDPLGVMPVFLQMTDGM
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC
DTKERRYIALKACTIAFIILVLFTLSGRFLFHFFGISTNGFRIVGGIIIFKIGYDMLQAH
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
FTHVKLNETERKEYSKDITITPLAIPMLCGPGAISSGITLMEDASEYTFKIVLLGVIALV
HHHEEECHHHHHHHCCCCEECHHHHHHHCCCCCHHCCCHHHHCCHHHHHHHHHHHHHHHH
CILSFFILCASTQLLKILGETGNNVMMRLMGLILMVIAVECFISGIRPVLIEILKQAHAC
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]