| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is ftnA [H]
Identifier: 29346517
GI number: 29346517
Start: 1395440
End: 1395922
Strand: Reverse
Name: ftnA [H]
Synonym: BT_1107
Alternate gene names: 29346517
Gene position: 1395922-1395440 (Counterclockwise)
Preceding gene: 29346518
Following gene: 29346516
Centisome position: 22.3
GC content: 44.31
Gene sequence:
>483_bases ATGACTGAAAAATTGCAAAATGCTCTGAATGAGCAAATCACAGCAGAATTATGGTCTGCCAACCTGTATTTATCAATGTC TTTTTATCTGGAAAGAGAGGGCTTTTCCGGAATGGCTCGCTGGATGCAGAAACAGTCTGCAGAAGAGACCGGGCATGCAT ATGCCATTGCCGGGTACATGATTAAGCGTGAGGCAACCCCGAAAGTAGACAAGGTCGATGTGGTTCCACAAGGTTGGGGT AACCCTGTTGAAGTATTCGAGCATGCTTTGGAGCATGAAAAACATGTTTCCAAACTGATTGATGAGTTGGTACAGGTAGC ATCCGAAGAGAAAGACAATGCCACTCAGGACTTCTTGTGGCAATTTGTTCGTGAGCAAGTAGAAGATGAAGCGAATGTAC TCAATATTGTTAGTCATCTGAGGAAAGCCGGAGACTGTGCTATCCTTTTTATGGATGCAAAACTGGGTGAACGGGAGTCA TAA
Upstream 100 bases:
>100_bases TACGTCCGGTATTAATTGAAATCTTGAAACAAGCCCATGCTTGTTCTTAAAGAAGAGAGATAATTTGGATTTATTATTAA CATTAAAAGTTTGATTCATC
Downstream 100 bases:
>100_bases ACCAGAATAATCAATAAAAATAAATAAAATGAAAATAGTAGATTTATTGGGAGGAAAGGCTGAGTACTACCTGAACCATA CATGTAAGACGATAGACAAA
Product: ferritin A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTEKLQNALNEQITAELWSANLYLSMSFYLEREGFSGMARWMQKQSAEETGHAYAIAGYMIKREATPKVDKVDVVPQGWG NPVEVFEHALEHEKHVSKLIDELVQVASEEKDNATQDFLWQFVREQVEDEANVLNIVSHLRKAGDCAILFMDAKLGERES
Sequences:
>Translated_160_residues MTEKLQNALNEQITAELWSANLYLSMSFYLEREGFSGMARWMQKQSAEETGHAYAIAGYMIKREATPKVDKVDVVPQGWG NPVEVFEHALEHEKHVSKLIDELVQVASEEKDNATQDFLWQFVREQVEDEANVLNIVSHLRKAGDCAILFMDAKLGERES >Mature_159_residues TEKLQNALNEQITAELWSANLYLSMSFYLEREGFSGMARWMQKQSAEETGHAYAIAGYMIKREATPKVDKVDVVPQGWGN PVEVFEHALEHEKHVSKLIDELVQVASEEKDNATQDFLWQFVREQVEDEANVLNIVSHLRKAGDCAILFMDAKLGERES
Specific function: May alleviate iron toxicity in the presence of oxygen [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=150, Percent_Identity=29.3333333333333, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1788212, Length=143, Percent_Identity=26.5734265734266, Blast_Score=62, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641673, Length=138, Percent_Identity=32.6086956521739, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 18275; Mature: 18144
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKLQNALNEQITAELWSANLYLSMSFYLEREGFSGMARWMQKQSAEETGHAYAIAGYM CCHHHHHHHHHHHHHHHHHCHHEEEHEEEHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH IKREATPKVDKVDVVPQGWGNPVEVFEHALEHEKHVSKLIDELVQVASEEKDNATQDFLW HHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QFVREQVEDEANVLNIVSHLRKAGDCAILFMDAKLGERES HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC >Mature Secondary Structure TEKLQNALNEQITAELWSANLYLSMSFYLEREGFSGMARWMQKQSAEETGHAYAIAGYM CHHHHHHHHHHHHHHHHHCHHEEEHEEEHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH IKREATPKVDKVDVVPQGWGNPVEVFEHALEHEKHVSKLIDELVQVASEEKDNATQDFLW HHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QFVREQVEDEANVLNIVSHLRKAGDCAILFMDAKLGERES HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA