| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is fbaB [H]
Identifier: 29346516
GI number: 29346516
Start: 1394362
End: 1395411
Strand: Reverse
Name: fbaB [H]
Synonym: BT_1106
Alternate gene names: 29346516
Gene position: 1395411-1394362 (Counterclockwise)
Preceding gene: 29346517
Following gene: 29346515
Centisome position: 22.29
GC content: 47.52
Gene sequence:
>1050_bases ATGAAAATAGTAGATTTATTGGGAGGAAAGGCTGAGTACTACCTGAACCATACATGTAAGACGATAGACAAACAACTTAT CCATATTCCGGGACCGGATATGATAGATAAGGTATGGATGAATTCCGACAGGAATATCCGTACATTGGAAAGTTTGCAGG CTTTATACGGACATGGACGTCTGGCCAATACGGGCTATGTATCCATTCTGCCTGTAGACCAGGGCATAGAACATTCTGCA GGAGCGTCTTTCGCCCCCAATCCGCTTTATTTCGATCCCGAAAACATCATAAAGCTGGCCATTGAAGGAGGGTGTAATGC CGTGGCATCCACATTCGGTGTGTTGGGCGCCGTGGCACGCAAATATGCACACAAGATACCTTTTATCGTCAAGCTGAACC ATAATGAGTTGCTGACTTATCCGAACAGCTACGACCAGGTAATGTTCGGTACGGTGAAAGAGGCATGGAACATGGGAGCC GTAGCTGTCGGTGCTACCATTTATTTCGGTTCGGAACAAAGCCGCCGCCAGATAGTGGAAGTGTCACAGGCTTTTGAATA TGCCCACGAACTGGGAATGGCTACTATTCTGTGGTGCTATTTGAGAAACAGCAGCTTCAAAAAGGATGGTACCGACTATC ATGCCGCTGCCGACTTGACAGGACAAGCCAACCATATCGGGGTTACCATTAAAGCCGATATCGTGAAGCAGAAGCTCCCA TCCAATAACGGCGGTTTCAAGGCTATCGGATTCGGAAAGACAAACGAGTGTATGTATTCGGAACTGACCACTGACCATCC GATAGACCTTTGCCGTTATCAGGTGGCGAATGGCTATATGGGACGTGTCGGATTGATTAACTCGGGCGGTGAATCCCATG GGGAATCCGACCTGCATGATGCTGTCGTAACGGCAGTAGTAAATAAGCGTGCAGGTGGTATGGGGCTGATCAGCGGTCGT AAGGCTTTCCAGAAACCGATGAAAGACGGAATTCAACTTCTGAACACCATTCAGGACGTATATCTGGATTCTTCAATAAC CATTGCATAA
Upstream 100 bases:
>100_bases AGTCATCTGAGGAAAGCCGGAGACTGTGCTATCCTTTTTATGGATGCAAAACTGGGTGAACGGGAGTCATAAACCAGAAT AATCAATAAAAATAAATAAA
Downstream 100 bases:
>100_bases AGAAGAAGTATCCATGAAAAGAATAGTGTTATTACGTCATGGCGAAAGTCTATGGAACAAAGAAAACCGTTTTACTGGAT GGACGGACGTGGATTTAAGC
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKIVDLLGGKAEYYLNHTCKTIDKQLIHIPGPDMIDKVWMNSDRNIRTLESLQALYGHGRLANTGYVSILPVDQGIEHSA GASFAPNPLYFDPENIIKLAIEGGCNAVASTFGVLGAVARKYAHKIPFIVKLNHNELLTYPNSYDQVMFGTVKEAWNMGA VAVGATIYFGSEQSRRQIVEVSQAFEYAHELGMATILWCYLRNSSFKKDGTDYHAAADLTGQANHIGVTIKADIVKQKLP SNNGGFKAIGFGKTNECMYSELTTDHPIDLCRYQVANGYMGRVGLINSGGESHGESDLHDAVVTAVVNKRAGGMGLISGR KAFQKPMKDGIQLLNTIQDVYLDSSITIA
Sequences:
>Translated_349_residues MKIVDLLGGKAEYYLNHTCKTIDKQLIHIPGPDMIDKVWMNSDRNIRTLESLQALYGHGRLANTGYVSILPVDQGIEHSA GASFAPNPLYFDPENIIKLAIEGGCNAVASTFGVLGAVARKYAHKIPFIVKLNHNELLTYPNSYDQVMFGTVKEAWNMGA VAVGATIYFGSEQSRRQIVEVSQAFEYAHELGMATILWCYLRNSSFKKDGTDYHAAADLTGQANHIGVTIKADIVKQKLP SNNGGFKAIGFGKTNECMYSELTTDHPIDLCRYQVANGYMGRVGLINSGGESHGESDLHDAVVTAVVNKRAGGMGLISGR KAFQKPMKDGIQLLNTIQDVYLDSSITIA >Mature_349_residues MKIVDLLGGKAEYYLNHTCKTIDKQLIHIPGPDMIDKVWMNSDRNIRTLESLQALYGHGRLANTGYVSILPVDQGIEHSA GASFAPNPLYFDPENIIKLAIEGGCNAVASTFGVLGAVARKYAHKIPFIVKLNHNELLTYPNSYDQVMFGTVKEAWNMGA VAVGATIYFGSEQSRRQIVEVSQAFEYAHELGMATILWCYLRNSSFKKDGTDYHAAADLTGQANHIGVTIKADIVKQKLP SNNGGFKAIGFGKTNECMYSELTTDHPIDLCRYQVANGYMGRVGLINSGGESHGESDLHDAVVTAVVNKRAGGMGLISGR KAFQKPMKDGIQLLNTIQDVYLDSSITIA
Specific function: Unknown
COG id: COG1830
COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoC/fbaB aldolase family. FbaB subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082042, Length=347, Percent_Identity=66.8587896253602, Blast_Score=503, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR002915 [H]
Pfam domain/function: PF01791 DeoC [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38095; Mature: 38095
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVDLLGGKAEYYLNHTCKTIDKQLIHIPGPDMIDKVWMNSDRNIRTLESLQALYGHGR CCCHHHHCCCEEEEHHHHHHHHHHHEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCC LANTGYVSILPVDQGIEHSAGASFAPNPLYFDPENIIKLAIEGGCNAVASTFGVLGAVAR CCCCCEEEEEECCCCCCCCCCCCCCCCCCEECHHHEEEEEECCCCHHHHHHHHHHHHHHH KYAHKIPFIVKLNHNELLTYPNSYDQVMFGTVKEAWNMGAVAVGATIYFGSEQSRRQIVE HHHHCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHH VSQAFEYAHELGMATILWCYLRNSSFKKDGTDYHAAADLTGQANHIGVTIKADIVKQKLP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEEHHHHHHHCC SNNGGFKAIGFGKTNECMYSELTTDHPIDLCRYQVANGYMGRVGLINSGGESHGESDLHD CCCCCEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH AVVTAVVNKRAGGMGLISGRKAFQKPMKDGIQLLNTIQDVYLDSSITIA HHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC >Mature Secondary Structure MKIVDLLGGKAEYYLNHTCKTIDKQLIHIPGPDMIDKVWMNSDRNIRTLESLQALYGHGR CCCHHHHCCCEEEEHHHHHHHHHHHEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCC LANTGYVSILPVDQGIEHSAGASFAPNPLYFDPENIIKLAIEGGCNAVASTFGVLGAVAR CCCCCEEEEEECCCCCCCCCCCCCCCCCCEECHHHEEEEEECCCCHHHHHHHHHHHHHHH KYAHKIPFIVKLNHNELLTYPNSYDQVMFGTVKEAWNMGAVAVGATIYFGSEQSRRQIVE HHHHCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHH VSQAFEYAHELGMATILWCYLRNSSFKKDGTDYHAAADLTGQANHIGVTIKADIVKQKLP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEEHHHHHHHCC SNNGGFKAIGFGKTNECMYSELTTDHPIDLCRYQVANGYMGRVGLINSGGESHGESDLHD CCCCCEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH AVVTAVVNKRAGGMGLISGRKAFQKPMKDGIQLLNTIQDVYLDSSITIA HHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]