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The map label for this gene is ybdN [H]

Identifier: 29346480

GI number: 29346480

Start: 1357327

End: 1358631

Strand: Reverse

Name: ybdN [H]

Synonym: BT_1070

Alternate gene names: 29346480

Gene position: 1358631-1357327 (Counterclockwise)

Preceding gene: 29346481

Following gene: 29346479

Centisome position: 21.7

GC content: 45.44

Gene sequence:

>1305_bases
ATGGGAAAAAAAACAATCACAGGAACAAAAAATGTATATGAATTAGCACAAGAGCGACTGAAAGTAATATTTAACGAGTT
TGATAATATTTATGTATCTTTCTCGGGAGGAAAGGATAGTGGGGTTCTGCTGAATATGTGTATCGACTACATCAGGCGGA
ATAATCTGAAAATACGTTTGGGAGTGTTTCACATGGACTATGAGATTCAATACAAGATGACCATCGACTATGTGGACAGG
ATACTGGAGGCGAACAAGGACATCCTGGATGTATACCGTGTGTGCGTGCCTTTCCGGGTATCTACGTGTACATCTATGTA
CCAGTCCTTCTGGCGGCCCTGGGAGGATAACAAGAAAGATATCTGGGTACGCTCCATGCCTAAGAAGGCCATGAAGAAGG
AGGATTTTCCTTTTTACAATACGACCATGTGGGATTATGAATTTCAGATGCGTTTTGCGCAGTGGCTCCATCAGAAAAAG
GATGCGGTACGCACCTGCTGTCTGATCGGTATCCGTACGCAGGAAAGTTTTAACCGCTGGCGATGTATCTATATGAGCCG
CAAATTCCAGATGTATCATAAGTATAGATGGACTTCAAAGGTCGGAAATGACATCTATAATGCCTATCCCATCTTCGACT
GGAAGACGACGGATGTGTGGACGGCAAACGGAAAATTCCAGTGGGACTATAATGTACTGTATGACCTGTATTATCGTGCC
GGAGTCAATCTGGAACGTCAACGGGTAGCAAGCCCGTTCATCAATGAAGCGCAGGAGAGTCTGGCGCTCTACCGGGTGCT
TGACCCTAACACCTGGGGGAAGATGATAGGACGGGTGAATGGCGTGAACTTCACCGGTATGTATGGAGGCACGCACGCTA
TGGGATGGCAGATGGTGAAACTTCCGGAAGGGTACACCTGGAGGGAGTTTATGTACTTCCTGCTCTCTACCTTGCCGGAA
CGGGCCCGAAAGGGGTATCTGCGTAAACTGTCTGTCAGTGTACATTTTTGGCGAACCAAAGGAGGCTGTCTGAGTGATTC
CACCATTCAGAAACTGATTGATGCCAAAGTGCCGATTATCGTGATGGACAATAGCAACTATAAGACATACAAGAAGCCGG
TGCGCATGGAATATCAGGATGATATCGATATTCCGGAATTTAGGGAAATACCGACTTACAAGCGTATGTGTATCTGTATC
CTCAAGAATGACCATGCCTGCAAATACATGGGATTCTCGCCGACCAAAGAGGAGATGAGTAAGAGAAGTCAAGTTATGGA
ACAATATAGAATCATAGTATCATGA

Upstream 100 bases:

>100_bases
CTCTGTCACGCTGATACAAGATCAGGAAACTTTTGAGAAATTCGAGTTTGCATCTATGGACAAGAAGTGGACACGCTATG
TAAAAATGAACAGATGAATT

Downstream 100 bases:

>100_bases
GTGTAGATAAAAGTCCGGTCTACGAGGTGAAAGCAGTGCCCGTAGAAAAAGTATTAGCGAACGATTATAACCCGAATGTC
GTAGCTCCTCCCGAAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MGKKTITGTKNVYELAQERLKVIFNEFDNIYVSFSGGKDSGVLLNMCIDYIRRNNLKIRLGVFHMDYEIQYKMTIDYVDR
ILEANKDILDVYRVCVPFRVSTCTSMYQSFWRPWEDNKKDIWVRSMPKKAMKKEDFPFYNTTMWDYEFQMRFAQWLHQKK
DAVRTCCLIGIRTQESFNRWRCIYMSRKFQMYHKYRWTSKVGNDIYNAYPIFDWKTTDVWTANGKFQWDYNVLYDLYYRA
GVNLERQRVASPFINEAQESLALYRVLDPNTWGKMIGRVNGVNFTGMYGGTHAMGWQMVKLPEGYTWREFMYFLLSTLPE
RARKGYLRKLSVSVHFWRTKGGCLSDSTIQKLIDAKVPIIVMDNSNYKTYKKPVRMEYQDDIDIPEFREIPTYKRMCICI
LKNDHACKYMGFSPTKEEMSKRSQVMEQYRIIVS

Sequences:

>Translated_434_residues
MGKKTITGTKNVYELAQERLKVIFNEFDNIYVSFSGGKDSGVLLNMCIDYIRRNNLKIRLGVFHMDYEIQYKMTIDYVDR
ILEANKDILDVYRVCVPFRVSTCTSMYQSFWRPWEDNKKDIWVRSMPKKAMKKEDFPFYNTTMWDYEFQMRFAQWLHQKK
DAVRTCCLIGIRTQESFNRWRCIYMSRKFQMYHKYRWTSKVGNDIYNAYPIFDWKTTDVWTANGKFQWDYNVLYDLYYRA
GVNLERQRVASPFINEAQESLALYRVLDPNTWGKMIGRVNGVNFTGMYGGTHAMGWQMVKLPEGYTWREFMYFLLSTLPE
RARKGYLRKLSVSVHFWRTKGGCLSDSTIQKLIDAKVPIIVMDNSNYKTYKKPVRMEYQDDIDIPEFREIPTYKRMCICI
LKNDHACKYMGFSPTKEEMSKRSQVMEQYRIIVS
>Mature_433_residues
GKKTITGTKNVYELAQERLKVIFNEFDNIYVSFSGGKDSGVLLNMCIDYIRRNNLKIRLGVFHMDYEIQYKMTIDYVDRI
LEANKDILDVYRVCVPFRVSTCTSMYQSFWRPWEDNKKDIWVRSMPKKAMKKEDFPFYNTTMWDYEFQMRFAQWLHQKKD
AVRTCCLIGIRTQESFNRWRCIYMSRKFQMYHKYRWTSKVGNDIYNAYPIFDWKTTDVWTANGKFQWDYNVLYDLYYRAG
VNLERQRVASPFINEAQESLALYRVLDPNTWGKMIGRVNGVNFTGMYGGTHAMGWQMVKLPEGYTWREFMYFLLSTLPER
ARKGYLRKLSVSVHFWRTKGGCLSDSTIQKLIDAKVPIIVMDNSNYKTYKKPVRMEYQDDIDIPEFREIPTYKRMCICIL
KNDHACKYMGFSPTKEEMSKRSQVMEQYRIIVS

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=417, Percent_Identity=33.5731414868106, Blast_Score=228, Evalue=7e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 51982; Mature: 51851

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKTITGTKNVYELAQERLKVIFNEFDNIYVSFSGGKDSGVLLNMCIDYIRRNNLKIRL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEE
GVFHMDYEIQYKMTIDYVDRILEANKDILDVYRVCVPFRVSTCTSMYQSFWRPWEDNKKD
EEEEEEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCE
IWVRSMPKKAMKKEDFPFYNTTMWDYEFQMRFAQWLHQKKDAVRTCCLIGIRTQESFNRW
EEEECCCHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHEEEECHHCCCCE
RCIYMSRKFQMYHKYRWTSKVGNDIYNAYPIFDWKTTDVWTANGKFQWDYNVLYDLYYRA
EEEEEHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCEEEECCCEEEECHHHHHHHHHHC
GVNLERQRVASPFINEAQESLALYRVLDPNTWGKMIGRVNGVNFTGMYGGTHAMGWQMVK
CCCHHHHHHHCHHHHHHHHHHEEEEEECCCHHHHHHHCCCCCEEEEECCCCHHCCEEEEE
LPEGYTWREFMYFLLSTLPERARKGYLRKLSVSVHFWRTKGGCLSDSTIQKLIDAKVPII
CCCCCCHHHHHHHHHHHHHHHHHCCHHEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCEE
VMDNSNYKTYKKPVRMEYQDDIDIPEFREIPTYKRMCICILKNDHACKYMGFSPTKEEMS
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEEECCCCEEECCCCCCHHHHH
KRSQVMEQYRIIVS
HHHHHHHHHHHHCC
>Mature Secondary Structure 
GKKTITGTKNVYELAQERLKVIFNEFDNIYVSFSGGKDSGVLLNMCIDYIRRNNLKIRL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEE
GVFHMDYEIQYKMTIDYVDRILEANKDILDVYRVCVPFRVSTCTSMYQSFWRPWEDNKKD
EEEEEEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCE
IWVRSMPKKAMKKEDFPFYNTTMWDYEFQMRFAQWLHQKKDAVRTCCLIGIRTQESFNRW
EEEECCCHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHEEEECHHCCCCE
RCIYMSRKFQMYHKYRWTSKVGNDIYNAYPIFDWKTTDVWTANGKFQWDYNVLYDLYYRA
EEEEEHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCEEEECCCEEEECHHHHHHHHHHC
GVNLERQRVASPFINEAQESLALYRVLDPNTWGKMIGRVNGVNFTGMYGGTHAMGWQMVK
CCCHHHHHHHCHHHHHHHHHHEEEEEECCCHHHHHHHCCCCCEEEEECCCCHHCCEEEEE
LPEGYTWREFMYFLLSTLPERARKGYLRKLSVSVHFWRTKGGCLSDSTIQKLIDAKVPII
CCCCCCHHHHHHHHHHHHHHHHHCCHHEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCEE
VMDNSNYKTYKKPVRMEYQDDIDIPEFREIPTYKRMCICILKNDHACKYMGFSPTKEEMS
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEEECCCCEEECCCCCCHHHHH
KRSQVMEQYRIIVS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]