Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346481

Identifier: 29346481

GI number: 29346481

Start: 1358635

End: 1359042

Strand: Reverse

Name: 29346481

Synonym: BT_1071

Alternate gene names: NA

Gene position: 1359042-1358635 (Counterclockwise)

Preceding gene: 29346489

Following gene: 29346480

Centisome position: 21.71

GC content: 38.97

Gene sequence:

>408_bases
ATGATACAGGTAATACAATTAAAAGGAAAAGACAAACATTTATATCAGCTTTTGGCGCCTCTAGTAATGGATCCGGATGT
AATACGTGCAAATAATAACTATCCGTTCAAGACAAGCGAAGATTTTGTTTGGTACATTGCGATTGATAACAGAGATGTGA
TAGGCTTTATTCCGGTTGAACAGAAAAGCGGGAAAAAGGCTGTCATTAATAATTATTATGTAGCTGCGGTGGACGAGAAA
CGAAAAGAGATCTTGTCGCTTCTGCTATCTTCTGTAGTCACGGCATTTATACCTGCGGGTTGGACGCTTAACTCTGTCAC
GCTGATACAAGATCAGGAAACTTTTGAGAAATTCGAGTTTGCATCTATGGACAAGAAGTGGACACGCTATGTAAAAATGA
ACAGATGA

Upstream 100 bases:

>100_bases
GAAACAAGAGGGGGAATTGCTAAAAAATAAATTTTTTACGCATGCTTTGTGCTGAAACGAGGAAATTTTACCTATTTTTG
TCTGTCTATTTTTGAATGCT

Downstream 100 bases:

>100_bases
ATTATGGGAAAAAAAACAATCACAGGAACAAAAAATGTATATGAATTAGCACAAGAGCGACTGAAAGTAATATTTAACGA
GTTTGATAATATTTATGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MIQVIQLKGKDKHLYQLLAPLVMDPDVIRANNNYPFKTSEDFVWYIAIDNRDVIGFIPVEQKSGKKAVINNYYVAAVDEK
RKEILSLLLSSVVTAFIPAGWTLNSVTLIQDQETFEKFEFASMDKKWTRYVKMNR

Sequences:

>Translated_135_residues
MIQVIQLKGKDKHLYQLLAPLVMDPDVIRANNNYPFKTSEDFVWYIAIDNRDVIGFIPVEQKSGKKAVINNYYVAAVDEK
RKEILSLLLSSVVTAFIPAGWTLNSVTLIQDQETFEKFEFASMDKKWTRYVKMNR
>Mature_135_residues
MIQVIQLKGKDKHLYQLLAPLVMDPDVIRANNNYPFKTSEDFVWYIAIDNRDVIGFIPVEQKSGKKAVINNYYVAAVDEK
RKEILSLLLSSVVTAFIPAGWTLNSVTLIQDQETFEKFEFASMDKKWTRYVKMNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15664; Mature: 15664

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVIQLKGKDKHLYQLLAPLVMDPDVIRANNNYPFKTSEDFVWYIAIDNRDVIGFIPVE
CEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECC
QKSGKKAVINNYYVAAVDEKRKEILSLLLSSVVTAFIPAGWTLNSVTLIQDQETFEKFEF
CCCCCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHH
ASMDKKWTRYVKMNR
HCCCHHHHHEEECCC
>Mature Secondary Structure
MIQVIQLKGKDKHLYQLLAPLVMDPDVIRANNNYPFKTSEDFVWYIAIDNRDVIGFIPVE
CEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECC
QKSGKKAVINNYYVAAVDEKRKEILSLLLSSVVTAFIPAGWTLNSVTLIQDQETFEKFEF
CCCCCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHH
ASMDKKWTRYVKMNR
HCCCHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA