| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346481
Identifier: 29346481
GI number: 29346481
Start: 1358635
End: 1359042
Strand: Reverse
Name: 29346481
Synonym: BT_1071
Alternate gene names: NA
Gene position: 1359042-1358635 (Counterclockwise)
Preceding gene: 29346489
Following gene: 29346480
Centisome position: 21.71
GC content: 38.97
Gene sequence:
>408_bases ATGATACAGGTAATACAATTAAAAGGAAAAGACAAACATTTATATCAGCTTTTGGCGCCTCTAGTAATGGATCCGGATGT AATACGTGCAAATAATAACTATCCGTTCAAGACAAGCGAAGATTTTGTTTGGTACATTGCGATTGATAACAGAGATGTGA TAGGCTTTATTCCGGTTGAACAGAAAAGCGGGAAAAAGGCTGTCATTAATAATTATTATGTAGCTGCGGTGGACGAGAAA CGAAAAGAGATCTTGTCGCTTCTGCTATCTTCTGTAGTCACGGCATTTATACCTGCGGGTTGGACGCTTAACTCTGTCAC GCTGATACAAGATCAGGAAACTTTTGAGAAATTCGAGTTTGCATCTATGGACAAGAAGTGGACACGCTATGTAAAAATGA ACAGATGA
Upstream 100 bases:
>100_bases GAAACAAGAGGGGGAATTGCTAAAAAATAAATTTTTTACGCATGCTTTGTGCTGAAACGAGGAAATTTTACCTATTTTTG TCTGTCTATTTTTGAATGCT
Downstream 100 bases:
>100_bases ATTATGGGAAAAAAAACAATCACAGGAACAAAAAATGTATATGAATTAGCACAAGAGCGACTGAAAGTAATATTTAACGA GTTTGATAATATTTATGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MIQVIQLKGKDKHLYQLLAPLVMDPDVIRANNNYPFKTSEDFVWYIAIDNRDVIGFIPVEQKSGKKAVINNYYVAAVDEK RKEILSLLLSSVVTAFIPAGWTLNSVTLIQDQETFEKFEFASMDKKWTRYVKMNR
Sequences:
>Translated_135_residues MIQVIQLKGKDKHLYQLLAPLVMDPDVIRANNNYPFKTSEDFVWYIAIDNRDVIGFIPVEQKSGKKAVINNYYVAAVDEK RKEILSLLLSSVVTAFIPAGWTLNSVTLIQDQETFEKFEFASMDKKWTRYVKMNR >Mature_135_residues MIQVIQLKGKDKHLYQLLAPLVMDPDVIRANNNYPFKTSEDFVWYIAIDNRDVIGFIPVEQKSGKKAVINNYYVAAVDEK RKEILSLLLSSVVTAFIPAGWTLNSVTLIQDQETFEKFEFASMDKKWTRYVKMNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15664; Mature: 15664
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQVIQLKGKDKHLYQLLAPLVMDPDVIRANNNYPFKTSEDFVWYIAIDNRDVIGFIPVE CEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECC QKSGKKAVINNYYVAAVDEKRKEILSLLLSSVVTAFIPAGWTLNSVTLIQDQETFEKFEF CCCCCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHH ASMDKKWTRYVKMNR HCCCHHHHHEEECCC >Mature Secondary Structure MIQVIQLKGKDKHLYQLLAPLVMDPDVIRANNNYPFKTSEDFVWYIAIDNRDVIGFIPVE CEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECC QKSGKKAVINNYYVAAVDEKRKEILSLLLSSVVTAFIPAGWTLNSVTLIQDQETFEKFEF CCCCCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHH ASMDKKWTRYVKMNR HCCCHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA