| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346476
Identifier: 29346476
GI number: 29346476
Start: 1353660
End: 1354229
Strand: Reverse
Name: 29346476
Synonym: BT_1066
Alternate gene names: NA
Gene position: 1354229-1353660 (Counterclockwise)
Preceding gene: 29346477
Following gene: 29346475
Centisome position: 21.63
GC content: 46.84
Gene sequence:
>570_bases ATGAAGAAAGTTAGTATACTCATAGTATTGGTGCTCGGATGTTTTATCGAGAGTAAAGCTCAGAAAGTTGCGCTTAAAAG CAACCTTCTATATGACGCTACGACTACCATGAATCTCGGGCTGGAATTCGGACTGGCACGTAAGTGGACGCTGGACGTTC CGGTGAACTATAATCCCTGGAAGCCGGACAACGGAAGACGTCTGCGCCATTGGGGAATACAGCCGGAAGTCCGCTACTGG TTTTGTGAGAAGTTCAGACGTACGTTCATCGGAGTGCATGGACATTATGCGGACTTCAATGTCGGTGGGTTCCCGGACTG GTCGTTTATTAGTGAGAATATGCAGAACAGCCGCTATCAGGGATATCTGTATGGCGGGGGTGTTTCCGTCGGTCATTCAT GGATTCTGAAGAAACGCTGGAGCATCGAAGCATCGGTAGGAGTGGGGTATGCACATATTGTATATGACAAATATCCGTGC AGGGCGTGTGGTACCAAACTGAAAGACAGTAGTAAAAACTATTTCGGTCCCACCAAAGCGAGTGTGTCACTTATTTACGT AATTAAATAA
Upstream 100 bases:
>100_bases TGACAACAATTATGCCCGGTAGTTTATATACAGGTGAAAGTACGGTGAAGCGTATCAAAATTGATATCACTCAAAAGGGT AATTAATAAACGTAAGATAA
Downstream 100 bases:
>100_bases AGTAGAATAGAATGATGAACAGAAGTATACAATTCATCGTGTGTGTATTGGCTATCTTATGTCAGAATATAAATTCGGCA GTTGCCCAGACACGCTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKKVSILIVLVLGCFIESKAQKVALKSNLLYDATTTMNLGLEFGLARKWTLDVPVNYNPWKPDNGRRLRHWGIQPEVRYW FCEKFRRTFIGVHGHYADFNVGGFPDWSFISENMQNSRYQGYLYGGGVSVGHSWILKKRWSIEASVGVGYAHIVYDKYPC RACGTKLKDSSKNYFGPTKASVSLIYVIK
Sequences:
>Translated_189_residues MKKVSILIVLVLGCFIESKAQKVALKSNLLYDATTTMNLGLEFGLARKWTLDVPVNYNPWKPDNGRRLRHWGIQPEVRYW FCEKFRRTFIGVHGHYADFNVGGFPDWSFISENMQNSRYQGYLYGGGVSVGHSWILKKRWSIEASVGVGYAHIVYDKYPC RACGTKLKDSSKNYFGPTKASVSLIYVIK >Mature_189_residues MKKVSILIVLVLGCFIESKAQKVALKSNLLYDATTTMNLGLEFGLARKWTLDVPVNYNPWKPDNGRRLRHWGIQPEVRYW FCEKFRRTFIGVHGHYADFNVGGFPDWSFISENMQNSRYQGYLYGGGVSVGHSWILKKRWSIEASVGVGYAHIVYDKYPC RACGTKLKDSSKNYFGPTKASVSLIYVIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21630; Mature: 21630
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVSILIVLVLGCFIESKAQKVALKSNLLYDATTTMNLGLEFGLARKWTLDVPVNYNPW CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEEECCEEECCCEEEEEECCCCCCCC KPDNGRRLRHWGIQPEVRYWFCEKFRRTFIGVHGHYADFNVGGFPDWSFISENMQNSRYQ CCCCCCEEEECCCCCCHHHHHHHHHHHHHEECCCCEECCCCCCCCCHHHHHHHHCCCCEE GYLYGGGVSVGHSWILKKRWSIEASVGVGYAHIVYDKYPCRACGTKLKDSSKNYFGPTKA EEEEECCCCCCCEEEEEEECCEEEECCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCCCC SVSLIYVIK CEEEEEEEC >Mature Secondary Structure MKKVSILIVLVLGCFIESKAQKVALKSNLLYDATTTMNLGLEFGLARKWTLDVPVNYNPW CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEEECCEEECCCEEEEEECCCCCCCC KPDNGRRLRHWGIQPEVRYWFCEKFRRTFIGVHGHYADFNVGGFPDWSFISENMQNSRYQ CCCCCCEEEECCCCCCHHHHHHHHHHHHHEECCCCEECCCCCCCCCHHHHHHHHCCCCEE GYLYGGGVSVGHSWILKKRWSIEASVGVGYAHIVYDKYPCRACGTKLKDSSKNYFGPTKA EEEEECCCCCCCEEEEEEECCEEEECCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCCCC SVSLIYVIK CEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA