Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29346475

Identifier: 29346475

GI number: 29346475

Start: 1353286

End: 1353648

Strand: Reverse

Name: 29346475

Synonym: BT_1065

Alternate gene names: NA

Gene position: 1353648-1353286 (Counterclockwise)

Preceding gene: 29346476

Following gene: 29346474

Centisome position: 21.62

GC content: 42.7

Gene sequence:

>363_bases
ATGATGAACAGAAGTATACAATTCATCGTGTGTGTATTGGCTATCTTATGTCAGAATATAAATTCGGCAGTTGCCCAGAC
ACGCTCTTATGACGGGGTTATCTCTGTAGTACCGGTACAGTTGGAACAGCGCGGTAAATCGGTTTATATAAATATTGACT
TCGTTCTGGAGGATGTAAAGGTCAAATCGGCACACGGAGTGGATTTTATTCCGCAACTGGTTGCTCCTGCATATACTTAC
AATCTTCCGAAAGTATCCATCAAGGGACATAATGAATACCTGGCGTATGAACGCTGGCTTTCATTGATGAGTGCGAAGGA
GAAGGATAGCTACGAAAAACCTTATGTGGTGGAAACAGGGTAG

Upstream 100 bases:

>100_bases
GGGCGTGTGGTACCAAACTGAAAGACAGTAGTAAAAACTATTTCGGTCCCACCAAAGCGAGTGTGTCACTTATTTACGTA
ATTAAATAAAGTAGAATAGA

Downstream 100 bases:

>100_bases
CAAGAAAAGAAATGATACGATTCGATACAGATATATATTGCCTTACGAATCGTGGATGGACGATGCCCGGGTGGACGTAC
AGCGCGACGAATGCGGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MMNRSIQFIVCVLAILCQNINSAVAQTRSYDGVISVVPVQLEQRGKSVYINIDFVLEDVKVKSAHGVDFIPQLVAPAYTY
NLPKVSIKGHNEYLAYERWLSLMSAKEKDSYEKPYVVETG

Sequences:

>Translated_120_residues
MMNRSIQFIVCVLAILCQNINSAVAQTRSYDGVISVVPVQLEQRGKSVYINIDFVLEDVKVKSAHGVDFIPQLVAPAYTY
NLPKVSIKGHNEYLAYERWLSLMSAKEKDSYEKPYVVETG
>Mature_120_residues
MMNRSIQFIVCVLAILCQNINSAVAQTRSYDGVISVVPVQLEQRGKSVYINIDFVLEDVKVKSAHGVDFIPQLVAPAYTY
NLPKVSIKGHNEYLAYERWLSLMSAKEKDSYEKPYVVETG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13545; Mature: 13545

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRSIQFIVCVLAILCQNINSAVAQTRSYDGVISVVPVQLEQRGKSVYINIDFVLEDVK
CCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEEEEEEEE
VKSAHGVDFIPQLVAPAYTYNLPKVSIKGHNEYLAYERWLSLMSAKEKDSYEKPYVVETG
ECCCCCCCHHHHHHCCHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECC
>Mature Secondary Structure
MMNRSIQFIVCVLAILCQNINSAVAQTRSYDGVISVVPVQLEQRGKSVYINIDFVLEDVK
CCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEEEEEEEE
VKSAHGVDFIPQLVAPAYTYNLPKVSIKGHNEYLAYERWLSLMSAKEKDSYEKPYVVETG
ECCCCCCCHHHHHHCCHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA