| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346447
Identifier: 29346447
GI number: 29346447
Start: 1308560
End: 1309747
Strand: Reverse
Name: 29346447
Synonym: BT_1037
Alternate gene names: NA
Gene position: 1309747-1308560 (Counterclockwise)
Preceding gene: 29346448
Following gene: 29346446
Centisome position: 20.92
GC content: 36.03
Gene sequence:
>1188_bases ATGGCATTTGGGGTACTGGCACTGGTCCATACTGCATGTGAAAATGCTAAGTATGATGTTATAGATAATTTAGTCTATAT AAATGAAGCGTCTACATCCAAAACTAAAGAATTGACATTGACAGAGGGTACGACGCGTACTTCGTTAACTGTACGTTTGG TGAATATTATTAATCAAACAATAAAAGCTAATTTATTTATTGACGAATCTGTATTAGATGCTTATAATAAGAAGAATGAA ACTAATTATAAAATGCCTCCTAAAGAATATATATCATTTCCTGAATCAGTGACAATTGAAGCAGGTTCTGTAAGTGCAGA TCCTGTGAATGTTGATATTAAAAGTTTTGAAGCTGAAGGCGGTGCTCAATATGCAATTCCCATCAGTATTAAGAATGTGG AAGGAGGTATTGAGAAGTCGGAATCCTCTTCCAGTTTTTTATTGGTTCTTGTGAAGCCTTTGAAACAAGCTGTTCCTAAA TTAACATGGTATAATGGTATGCATGCAGCCCCGGAAGGAGCTTGGGGGTTAGCTTTGCCAAATTATACATTGGAATGGTG GAGTAAAGTCACCTCTAAATCAGGGAACGGTGGATATACTAAGAATAATCAGGCTATAATAAACTCAGGAGGTTTAGGGA CAGAACTATATATACGGTTTGGTGACTTAATCTATTCCGAGAATGGTAGCTATAAAAATAATTTCCTACAAGTAAAAACG ATGGGGTCTCAATTTGATACAGGTGATCCAACTAAGGGAAAAGGTTTAGAAGCACAAAAATGGTATCATTTTGCAGTGAG TTATGATGCAGCATCCGGTACTACTTTATTGTACCAAAATGGTACTGTAGTTGCCTCATTATCTTCTTCAATAGGACAAC CGATGAATATTGATCAATTTCAGATGATTTCTTCAGGAGAAGAATATTTTCCGGATTTCTGTGAAATGTGTCAGGTTCGT TTTTGGAAAGTTACACGCACAGTTAATCAGATAAAGAAATCTATGTATACCGAAGTTGATTATACAGACAAGAATTTGTT GTTGTATCTGCCAATGAATGAAGGTGAAGGAGCTACAATACTACACGATGTAACCGGTAATGGTCATGATGTGGAAATTG GCAATTCTAACCTAGGTAACGAAAACCGTCAAAAGGTGACATGGGAAACATATTCATTTGCTCAATAA
Upstream 100 bases:
>100_bases GATTATCCCACAGTGCGTGCAGCTATTGCTGCACAGAATCCTCCTATTAATAACTAAAAGAAAGGGTTAAACAATGAAGA GAATATCTTTACTTAAAATA
Downstream 100 bases:
>100_bases TTTAAAACAGTATGATATGAAAGCATTATTTAAATATATATTATACAGTACATTTTTTGCTATGTCATTGCCATTAGTCA CAGCATGTGACGATGACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MAFGVLALVHTACENAKYDVIDNLVYINEASTSKTKELTLTEGTTRTSLTVRLVNIINQTIKANLFIDESVLDAYNKKNE TNYKMPPKEYISFPESVTIEAGSVSADPVNVDIKSFEAEGGAQYAIPISIKNVEGGIEKSESSSSFLLVLVKPLKQAVPK LTWYNGMHAAPEGAWGLALPNYTLEWWSKVTSKSGNGGYTKNNQAIINSGGLGTELYIRFGDLIYSENGSYKNNFLQVKT MGSQFDTGDPTKGKGLEAQKWYHFAVSYDAASGTTLLYQNGTVVASLSSSIGQPMNIDQFQMISSGEEYFPDFCEMCQVR FWKVTRTVNQIKKSMYTEVDYTDKNLLLYLPMNEGEGATILHDVTGNGHDVEIGNSNLGNENRQKVTWETYSFAQ
Sequences:
>Translated_395_residues MAFGVLALVHTACENAKYDVIDNLVYINEASTSKTKELTLTEGTTRTSLTVRLVNIINQTIKANLFIDESVLDAYNKKNE TNYKMPPKEYISFPESVTIEAGSVSADPVNVDIKSFEAEGGAQYAIPISIKNVEGGIEKSESSSSFLLVLVKPLKQAVPK LTWYNGMHAAPEGAWGLALPNYTLEWWSKVTSKSGNGGYTKNNQAIINSGGLGTELYIRFGDLIYSENGSYKNNFLQVKT MGSQFDTGDPTKGKGLEAQKWYHFAVSYDAASGTTLLYQNGTVVASLSSSIGQPMNIDQFQMISSGEEYFPDFCEMCQVR FWKVTRTVNQIKKSMYTEVDYTDKNLLLYLPMNEGEGATILHDVTGNGHDVEIGNSNLGNENRQKVTWETYSFAQ >Mature_394_residues AFGVLALVHTACENAKYDVIDNLVYINEASTSKTKELTLTEGTTRTSLTVRLVNIINQTIKANLFIDESVLDAYNKKNET NYKMPPKEYISFPESVTIEAGSVSADPVNVDIKSFEAEGGAQYAIPISIKNVEGGIEKSESSSSFLLVLVKPLKQAVPKL TWYNGMHAAPEGAWGLALPNYTLEWWSKVTSKSGNGGYTKNNQAIINSGGLGTELYIRFGDLIYSENGSYKNNFLQVKTM GSQFDTGDPTKGKGLEAQKWYHFAVSYDAASGTTLLYQNGTVVASLSSSIGQPMNIDQFQMISSGEEYFPDFCEMCQVRF WKVTRTVNQIKKSMYTEVDYTDKNLLLYLPMNEGEGATILHDVTGNGHDVEIGNSNLGNENRQKVTWETYSFAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43681; Mature: 43550
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFGVLALVHTACENAKYDVIDNLVYINEASTSKTKELTLTEGTTRTSLTVRLVNIINQT CCHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCCEEEEEECCCCCEEHHHHHHHHHHHH IKANLFIDESVLDAYNKKNETNYKMPPKEYISFPESVTIEAGSVSADPVNVDIKSFEAEG HEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCC GAQYAIPISIKNVEGGIEKSESSSSFLLVLVKPLKQAVPKLTWYNGMHAAPEGAWGLALP CCEEEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHCCCEEECCCCCCCCCCCCEEECC NYTLEWWSKVTSKSGNGGYTKNNQAIINSGGLGTELYIRFGDLIYSENGSYKNNFLQVKT CCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCCEEEEEE MGSQFDTGDPTKGKGLEAQKWYHFAVSYDAASGTTLLYQNGTVVASLSSSIGQPMNIDQF CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCEEEEEEHHHCCCCCCCCHH QMISSGEEYFPDFCEMCQVRFWKVTRTVNQIKKSMYTEVDYTDKNLLLYLPMNEGEGATI HHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEE LHDVTGNGHDVEIGNSNLGNENRQKVTWETYSFAQ EEECCCCCCEEEECCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure AFGVLALVHTACENAKYDVIDNLVYINEASTSKTKELTLTEGTTRTSLTVRLVNIINQT CHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCCEEEEEECCCCCEEHHHHHHHHHHHH IKANLFIDESVLDAYNKKNETNYKMPPKEYISFPESVTIEAGSVSADPVNVDIKSFEAEG HEEEEEEEHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCC GAQYAIPISIKNVEGGIEKSESSSSFLLVLVKPLKQAVPKLTWYNGMHAAPEGAWGLALP CCEEEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHCCCEEECCCCCCCCCCCCEEECC NYTLEWWSKVTSKSGNGGYTKNNQAIINSGGLGTELYIRFGDLIYSENGSYKNNFLQVKT CCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCCEEEEEE MGSQFDTGDPTKGKGLEAQKWYHFAVSYDAASGTTLLYQNGTVVASLSSSIGQPMNIDQF CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCEEEEEEHHHCCCCCCCCHH QMISSGEEYFPDFCEMCQVRFWKVTRTVNQIKKSMYTEVDYTDKNLLLYLPMNEGEGATI HHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEE LHDVTGNGHDVEIGNSNLGNENRQKVTWETYSFAQ EEECCCCCCEEEECCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA