| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346448
Identifier: 29346448
GI number: 29346448
Start: 1309791
End: 1310813
Strand: Reverse
Name: 29346448
Synonym: BT_1038
Alternate gene names: NA
Gene position: 1310813-1309791 (Counterclockwise)
Preceding gene: 29346449
Following gene: 29346447
Centisome position: 20.94
GC content: 40.66
Gene sequence:
>1023_bases ATGAAAACGAGCAAATTGAAAAAAATAATATACGGAATAGGAATTTCTCTCTTTTTTTCGCAGGGATTCTTAAATATCGC ATGTAGTGATTGGACCGACATAGAGGCGAAAGATTATTATGAACCTCCTACGCAAGGTTATGAAAATAATTTGAAGGATT ATTTTAACTCTCCACATAAGATTATGTTTGGCTGGTTTGGTAACTGGGCAGGTAAGGGAGGTTCTTCCATGCAATATGCT TTATGTGGATTACCGGACAGTACGGATTTTGTGAGCCTTTGGCTCTGTTGGGGAAATCTGACGGTTGAGCAACAGGCTGA TTTAAAAGACTTTCAGGCTAAGGGTTCCAGAGCAGTGCTTTGTTGGCGCGCAGGAGATATTGGTGATAATCTCACACCGG GGGGTAACGATGATGCAGTGAAGGAAGCGTTTTGGGGCTTTGATCCTAAAGATGAGCAATCTTGCATTGAGGCTGCTAAG AAATATGCACTTGCTATTGTAGATACATGTAACAAATATAATATCGATGGATTTGATTATGATATTGAGGATTGGGGGAC TTTAATGAACTCCAGTATGCCATCAGTACCCAATGCGTTTATGAAGACTTTACGTGAGGAGTTTGATAAGACGGGGAAAA TGTTGGTTGCTGATATCCCTGGTGGTGCAGGTTGGTTGAGCTTTTATGAAGTGCTTTCAGAGGAAACAGTTCTAAGTCTT GATTATATAGCTTGGCAGACCTATGAACTAGGACATTCTGGATTGGATTCTTTCTTTGAAGCTGTACGTAGAAGTCACCC TAATGTCTTTAAAGAAGCTATGGGGAAATCTATTGTGACTGCAACTTTTGAAAGAGCAGTGGATAAGCATTACTTTACCG AGCAACAGAGCTATCATCCGGCTTGTGGAATAGAACATGCAGGTATGGGGGCTTATCATATTGAGTATGATTATCCTGGA AATCCTGATTATCCCACAGTGCGTGCAGCTATTGCTGCACAGAATCCTCCTATTAATAACTAA
Upstream 100 bases:
>100_bases TGAAAGCAGCTGTATCAATGTTAGGTGGTGCAGATAACTCTGCCACAGATCTTTGGTGGGCTAAGAAAAATTAAATCAGA ACGTTAAAATAATTTTTATT
Downstream 100 bases:
>100_bases AAGAAAGGGTTAAACAATGAAGAGAATATCTTTACTTAAAATAATGGCATTTGGGGTACTGGCACTGGTCCATACTGCAT GTGAAAATGCTAAGTATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKTSKLKKIIYGIGISLFFSQGFLNIACSDWTDIEAKDYYEPPTQGYENNLKDYFNSPHKIMFGWFGNWAGKGGSSMQYA LCGLPDSTDFVSLWLCWGNLTVEQQADLKDFQAKGSRAVLCWRAGDIGDNLTPGGNDDAVKEAFWGFDPKDEQSCIEAAK KYALAIVDTCNKYNIDGFDYDIEDWGTLMNSSMPSVPNAFMKTLREEFDKTGKMLVADIPGGAGWLSFYEVLSEETVLSL DYIAWQTYELGHSGLDSFFEAVRRSHPNVFKEAMGKSIVTATFERAVDKHYFTEQQSYHPACGIEHAGMGAYHIEYDYPG NPDYPTVRAAIAAQNPPINN
Sequences:
>Translated_340_residues MKTSKLKKIIYGIGISLFFSQGFLNIACSDWTDIEAKDYYEPPTQGYENNLKDYFNSPHKIMFGWFGNWAGKGGSSMQYA LCGLPDSTDFVSLWLCWGNLTVEQQADLKDFQAKGSRAVLCWRAGDIGDNLTPGGNDDAVKEAFWGFDPKDEQSCIEAAK KYALAIVDTCNKYNIDGFDYDIEDWGTLMNSSMPSVPNAFMKTLREEFDKTGKMLVADIPGGAGWLSFYEVLSEETVLSL DYIAWQTYELGHSGLDSFFEAVRRSHPNVFKEAMGKSIVTATFERAVDKHYFTEQQSYHPACGIEHAGMGAYHIEYDYPG NPDYPTVRAAIAAQNPPINN >Mature_340_residues MKTSKLKKIIYGIGISLFFSQGFLNIACSDWTDIEAKDYYEPPTQGYENNLKDYFNSPHKIMFGWFGNWAGKGGSSMQYA LCGLPDSTDFVSLWLCWGNLTVEQQADLKDFQAKGSRAVLCWRAGDIGDNLTPGGNDDAVKEAFWGFDPKDEQSCIEAAK KYALAIVDTCNKYNIDGFDYDIEDWGTLMNSSMPSVPNAFMKTLREEFDKTGKMLVADIPGGAGWLSFYEVLSEETVLSL DYIAWQTYELGHSGLDSFFEAVRRSHPNVFKEAMGKSIVTATFERAVDKHYFTEQQSYHPACGIEHAGMGAYHIEYDYPG NPDYPTVRAAIAAQNPPINN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38073; Mature: 38073
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSKLKKIIYGIGISLFFSQGFLNIACSDWTDIEAKDYYEPPTQGYENNLKDYFNSPHK CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCE IMFGWFGNWAGKGGSSMQYALCGLPDSTDFVSLWLCWGNLTVEQQADLKDFQAKGSRAVL EEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCEECCCCCHHHHHCCCCEEEE CWRAGDIGDNLTPGGNDDAVKEAFWGFDPKDEQSCIEAAKKYALAIVDTCNKYNIDGFDY EEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCC DIEDWGTLMNSSMPSVPNAFMKTLREEFDKTGKMLVADIPGGAGWLSFYEVLSEETVLSL CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEE DYIAWQTYELGHSGLDSFFEAVRRSHPNVFKEAMGKSIVTATFERAVDKHYFTEQQSYHP HHHEEEHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC ACGIEHAGMGAYHIEYDYPGNPDYPTVRAAIAAQNPPINN CCCCCCCCCCEEEEEECCCCCCCCCHHHHEEECCCCCCCC >Mature Secondary Structure MKTSKLKKIIYGIGISLFFSQGFLNIACSDWTDIEAKDYYEPPTQGYENNLKDYFNSPHK CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCE IMFGWFGNWAGKGGSSMQYALCGLPDSTDFVSLWLCWGNLTVEQQADLKDFQAKGSRAVL EEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCEECCCCCHHHHHCCCCEEEE CWRAGDIGDNLTPGGNDDAVKEAFWGFDPKDEQSCIEAAKKYALAIVDTCNKYNIDGFDY EEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCC DIEDWGTLMNSSMPSVPNAFMKTLREEFDKTGKMLVADIPGGAGWLSFYEVLSEETVLSL CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEE DYIAWQTYELGHSGLDSFFEAVRRSHPNVFKEAMGKSIVTATFERAVDKHYFTEQQSYHP HHHEEEHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC ACGIEHAGMGAYHIEYDYPGNPDYPTVRAAIAAQNPPINN CCCCCCCCCCEEEEEECCCCCCCCCHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA