| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29144795
Identifier: 29144795
GI number: 29144795
Start: 4710495
End: 4711025
Strand: Direct
Name: 29144795
Synonym: t4559
Alternate gene names: NA
Gene position: 4710495-4711025 (Clockwise)
Preceding gene: 29144794
Following gene: 29144796
Centisome position: 98.3
GC content: 50.09
Gene sequence:
>531_bases ATGGCTGGAAAATGGAACGTTCTTTCATTGTTGGCGTTCCGTCCTTGTCAGCCTGCTTTGCCGCATGATAATCACGGAGG GGGGATGGACGCCATCTATTTAAAACTGGACGGTATTGAAGGCGAAAGCCAGATCAAAGGTTTTGAAAACCAAATAAAAC TTATTGCTTACAACCACAACCCGACGAAACGGGAGTCCGGCGAAGCGAGAGGGACATATATTGGAGGGTTGACGCTGACA AAGCCAGTCGATCTTGCTACGCTTGGCCTCTATGAGCACTATTGTAACGGGAAAACGGTGAAAGAAGGCGTGCTGACATT ATGCCGTAGTGATAAGGGCGCAATGCTGCCATTTATTATTTATACGCTCACCAATGTGCGAATTTCACGCATGAGCAATC ATGGCGACGCCGAAGGCAGCGCCACGGAGACCGTGGATTTGGTTTATAGCCATATTCGCTGGGATATTCCCGCATTGGCG TCGAAAAGCAAAACACGGCGGCCCCTTCACCGACAGGCGCTGTGGCGATGA
Upstream 100 bases:
>100_bases GCTATTGTAAAATGGATTGTTGATGGCAGAAGGTATTTAGCAAGAATCCAGTTATAGCAGATTGTCGGTATTTAATCTGG TATACAGAGACACCAACGAA
Downstream 100 bases:
>100_bases GGACAAAACAAGCTTGCGGACTCGCAGTGGGCGATGCTGTATAGCGAAATGGCATTTAGCGGCTTGCGAAGGCTGATGAG CGCTCATGTAACCAATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MAGKWNVLSLLAFRPCQPALPHDNHGGGMDAIYLKLDGIEGESQIKGFENQIKLIAYNHNPTKRESGEARGTYIGGLTLT KPVDLATLGLYEHYCNGKTVKEGVLTLCRSDKGAMLPFIIYTLTNVRISRMSNHGDAEGSATETVDLVYSHIRWDIPALA SKSKTRRPLHRQALWR
Sequences:
>Translated_176_residues MAGKWNVLSLLAFRPCQPALPHDNHGGGMDAIYLKLDGIEGESQIKGFENQIKLIAYNHNPTKRESGEARGTYIGGLTLT KPVDLATLGLYEHYCNGKTVKEGVLTLCRSDKGAMLPFIIYTLTNVRISRMSNHGDAEGSATETVDLVYSHIRWDIPALA SKSKTRRPLHRQALWR >Mature_175_residues AGKWNVLSLLAFRPCQPALPHDNHGGGMDAIYLKLDGIEGESQIKGFENQIKLIAYNHNPTKRESGEARGTYIGGLTLTK PVDLATLGLYEHYCNGKTVKEGVLTLCRSDKGAMLPFIIYTLTNVRISRMSNHGDAEGSATETVDLVYSHIRWDIPALAS KSKTRRPLHRQALWR
Specific function: Unknown
COG id: COG3157
COG function: function code S; Hemolysin-coregulated protein (uncharacterized)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19548; Mature: 19416
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKWNVLSLLAFRPCQPALPHDNHGGGMDAIYLKLDGIEGESQIKGFENQIKLIAYNHN CCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHCCCCCCEEEEEECCC PTKRESGEARGTYIGGLTLTKPVDLATLGLYEHYCNGKTVKEGVLTLCRSDKGAMLPFII CCCCCCCCCCCEEECCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH YTLTNVRISRMSNHGDAEGSATETVDLVYSHIRWDIPALASKSKTRRPLHRQALWR HHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHCCC >Mature Secondary Structure AGKWNVLSLLAFRPCQPALPHDNHGGGMDAIYLKLDGIEGESQIKGFENQIKLIAYNHN CCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHCCCCCCEEEEEECCC PTKRESGEARGTYIGGLTLTKPVDLATLGLYEHYCNGKTVKEGVLTLCRSDKGAMLPFII CCCCCCCCCCCEEECCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH YTLTNVRISRMSNHGDAEGSATETVDLVYSHIRWDIPALASKSKTRRPLHRQALWR HHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA