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The map label for this gene is ygeA [C]

Identifier: 29144796

GI number: 29144796

Start: 4711264

End: 4711998

Strand: Direct

Name: ygeA [C]

Synonym: t4560

Alternate gene names: 29144796

Gene position: 4711264-4711998 (Clockwise)

Preceding gene: 29144795

Following gene: 29144805

Centisome position: 98.32

GC content: 55.1

Gene sequence:

>735_bases
ATGAAACACACCATTGGGATACTGGGGGGGATGGGACCTGCGGCAACGGCGGATATGTTGGAAAAATTTGTTGAATTGCG
ACATGTCAGTTGTGATCAACAACACATCCCGCTCATTGTCAGCTCTATCCCTGATATTCCCGATCGTACAGCATGTCTGT
TATCCGGCGGGCCTTCGCCATACCGTTATCTGGAGCGTTATCTGCATATGCTGGAAGACGCCGGGGCGGAGTGTATCGTT
ATCCCATGCAACACTGCGCATTATTGGTTTGATGATTTACAGAACGTCGCGAAAGCGCGAATGATCAGCATCCTGGACGC
CACCCTGGGGGATATTCCGCCATCGGCGCGGCACGTTGGTCTGCTGGCGACCAATGCGACGCTGGCAACCGGGTTATATC
AAAAGAAAGCGCTGGCGCGGGGGCTGACGTTAATTCAGCCAGAAGACGCGGGGCAGGCGTTGGTAATGCAGGCTATTTAT
ACGCTTAAACGTGGCGATAAAACTGCGGCGCAAGCGCTGCTGCTGCCGCAAATCGATAGCCTTATTGCCCGTGGCGCTCA
GGCAATTATTATGGGGTGTACCGAAATTCCGCTTATTGTGGCCGGACATGAACGCGCGATAGCGTGCCCGATGATTGATT
CCACAGCGTCGCTGGTGCGCGCGGCGATTCGTTGGTATGAGTCCTGGCCAGACACCCGCGCCTCTTTGACCGGGGAACAA
CGCCTTACCGCCTGA

Upstream 100 bases:

>100_bases
TATGATTTTTACGCATAGCCGCTAATAAAACGGCATTTTTTATATACACATCAAGTTGATAGTGTGTTTCTGACCTTGAC
GTAAATAAGCGGGAAAAGCG

Downstream 100 bases:

>100_bases
TGTGTTTACAGCGCGGCCTGAAGCCCACGCAGGTCGCGCCAAAATGTTTCGGCTACCTGACTCATGCGGGTATTCATGCG
ATAAGCATAAGCCTGGATCG

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKHTIGILGGMGPAATADMLEKFVELRHVSCDQQHIPLIVSSIPDIPDRTACLLSGGPSPYRYLERYLHMLEDAGAECIV
IPCNTAHYWFDDLQNVAKARMISILDATLGDIPPSARHVGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIY
TLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYESWPDTRASLTGEQ
RLTA

Sequences:

>Translated_244_residues
MKHTIGILGGMGPAATADMLEKFVELRHVSCDQQHIPLIVSSIPDIPDRTACLLSGGPSPYRYLERYLHMLEDAGAECIV
IPCNTAHYWFDDLQNVAKARMISILDATLGDIPPSARHVGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIY
TLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYESWPDTRASLTGEQ
RLTA
>Mature_244_residues
MKHTIGILGGMGPAATADMLEKFVELRHVSCDQQHIPLIVSSIPDIPDRTACLLSGGPSPYRYLERYLHMLEDAGAECIV
IPCNTAHYWFDDLQNVAKARMISILDATLGDIPPSARHVGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIY
TLKRGDKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYESWPDTRASLTGEQ
RLTA

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 26381; Mature: 26381

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHTIGILGGMGPAATADMLEKFVELRHVSCDQQHIPLIVSSIPDIPDRTACLLSGGPSP
CCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCH
YRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPPSARHVG
HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAAQALLLPQIDS
EEEECHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYESWPDTRASLTGEQ
HHHCCCCEEEEECCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCH
RLTA
HCCC
>Mature Secondary Structure
MKHTIGILGGMGPAATADMLEKFVELRHVSCDQQHIPLIVSSIPDIPDRTACLLSGGPSP
CCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCH
YRYLERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIPPSARHVG
HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRGDKTAAQALLLPQIDS
EEEECHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRWYESWPDTRASLTGEQ
HHHCCCCEEEEECCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCH
RLTA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1705542 [H]