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The map label for this gene is tviA

Identifier: 29144604

GI number: 29144604

Start: 4506949

End: 4507488

Strand: Reverse

Name: tviA

Synonym: t4353

Alternate gene names: 29144604

Gene position: 4507488-4506949 (Counterclockwise)

Preceding gene: 29144611

Following gene: 29144603

Centisome position: 94.06

GC content: 38.52

Gene sequence:

>540_bases
ATGAGGTTTCATCATTTCTGGCCTCCGAATGATATCTATTTCGGGGTTGGAGCTGCTGGCATTATTGAAGAAGTGTCACT
GATAACAAATGACAGAAATTATTTGTTTGTGAACCTAAATCGCTACAGCCTGTTAAATGCCCTGAATTTTTTCACGCGAA
TGAGTGATATTAATAAAATAATCGTTATCATTTCAAGTTCGCGACTAATGCCCCTTGCACGTTTTTGGTTGACAGAGTGC
AAAAATGTTATTGCTGTTTTCGATGCGGCAACATCAGTCCAGGATATTATCAGAAATGTCAGTCAACACCAAAGTGGTGA
AAAGATCTTGACGGAGCAGAGAGATTATCGTTTCAGAATTAACCGTAAGGATATAGTAAAGATGAAATATTTCCTTTCGG
AAAGTGGTATGGAAGAGCTTCAGGATAGATTTATGAACTCATCATCGACTATGTATCGCTGGAGAAAAGAATTGGCAGTA
AAATTTGGAGTACGTGAGCCGCGCTATCTGTTATTGCCGGATTCAGTTACTTTACTGTAA

Upstream 100 bases:

>100_bases
AATTTTATTGTTAGTTAATTGTTAACAGGAGCAAAGAATTAGATATTGCTTGTACCTTTTCTATGGATGAAATTAGGTTA
TTTCAGCATAAGGAGACTTC

Downstream 100 bases:

>100_bases
TGCGGTAATTTTTATTGAGTAAAACACGGACAAGTATTTCGTTTCAGCACAAAATTATTTTCGTTACTCATTGGCGTTAA
TACATATATTCTCAGCGACT

Product: VI polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MRFHHFWPPNDIYFGVGAAGIIEEVSLITNDRNYLFVNLNRYSLLNALNFFTRMSDINKIIVIISSSRLMPLARFWLTEC
KNVIAVFDAATSVQDIIRNVSQHQSGEKILTEQRDYRFRINRKDIVKMKYFLSESGMEELQDRFMNSSSTMYRWRKELAV
KFGVREPRYLLLPDSVTLL

Sequences:

>Translated_179_residues
MRFHHFWPPNDIYFGVGAAGIIEEVSLITNDRNYLFVNLNRYSLLNALNFFTRMSDINKIIVIISSSRLMPLARFWLTEC
KNVIAVFDAATSVQDIIRNVSQHQSGEKILTEQRDYRFRINRKDIVKMKYFLSESGMEELQDRFMNSSSTMYRWRKELAV
KFGVREPRYLLLPDSVTLL
>Mature_179_residues
MRFHHFWPPNDIYFGVGAAGIIEEVSLITNDRNYLFVNLNRYSLLNALNFFTRMSDINKIIVIISSSRLMPLARFWLTEC
KNVIAVFDAATSVQDIIRNVSQHQSGEKILTEQRDYRFRINRKDIVKMKYFLSESGMEELQDRFMNSSSTMYRWRKELAV
KFGVREPRYLLLPDSVTLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TVIA_SALTI (Q04971)

Other databases:

- EMBL:   X67785
- EMBL:   D14156
- EMBL:   AL627283
- EMBL:   AE014613
- PIR:   A36892
- RefSeq:   NP_458741.1
- RefSeq:   NP_807946.1
- GeneID:   1071482
- GeneID:   1250863
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t4353
- KEGG:   sty:STY4662
- HOGENOM:   HBG675568
- OMA:   ISSSRLM
- ProtClustDB:   PRK15183
- BioCyc:   SENT209261:T4353-MONOMER
- BioCyc:   SENT220341:STY4662-MONOMER
- InterPro:   IPR017032
- PIRSF:   PIRSF034659

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21114; Mature: 21114

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFHHFWPPNDIYFGVGAAGIIEEVSLITNDRNYLFVNLNRYSLLNALNFFTRMSDINKI
CCCCCCCCCCCEEECCCHHHHHHHHHHEECCCCEEEEEECHHHHHHHHHHHHHHHCCCEE
IVIISSSRLMPLARFWLTECKNVIAVFDAATSVQDIIRNVSQHQSGEKILTEQRDYRFRI
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEE
NRKDIVKMKYFLSESGMEELQDRFMNSSSTMYRWRKELAVKFGVREPRYLLLPDSVTLL
CCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEECC
>Mature Secondary Structure
MRFHHFWPPNDIYFGVGAAGIIEEVSLITNDRNYLFVNLNRYSLLNALNFFTRMSDINKI
CCCCCCCCCCCEEECCCHHHHHHHHHHEECCCCEEEEEECHHHHHHHHHHHHHHHCCCEE
IVIISSSRLMPLARFWLTECKNVIAVFDAATSVQDIIRNVSQHQSGEKILTEQRDYRFRI
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEE
NRKDIVKMKYFLSESGMEELQDRFMNSSSTMYRWRKELAVKFGVREPRYLLLPDSVTLL
CCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8248629; 8331073; 11677608; 12644504