Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29144552
Identifier: 29144552
GI number: 29144552
Start: 4459897
End: 4462677
Strand: Reverse
Name: 29144552
Synonym: t4297
Alternate gene names: NA
Gene position: 4462677-4459897 (Counterclockwise)
Preceding gene: 29144553
Following gene: 29144551
Centisome position: 93.13
GC content: 51.42
Gene sequence:
>2781_bases ATGAGTGATAATAACCTGCGACTGCAGGTAGTTCTGGGGGCGGTGGATAAGTTAACCCGCCCATTTAAAAATGCACAGGC TGGCTCTAAGGAGCTGGCATCAGCTATTAGACAAACCCGCGATCAGATTAAAAAGCTGAGTGATGCTGGAGGTCAGCTTA AATCTTTCGATCAGCTAACTCAAAGTGTTAGCCGTACTGGTGCCGAACTGGATCAGGCGAGGCTACGCGCTCAAATGATG ACGCGCGAAATGTCTTCTTTGGAATCCCCGACAAAAAAACAAACGCAGGCGCTTGAAGCTCAGTGGCGTGCTGTTTCACG TCTTGAACAAAAACAGCAACAGGAAACTCGCCAGATGGCGGCAGCCAGAGCTGAGCTTTATCGGCTGGGGTTATCTGCTG GGGGCGGAGCGCGTGAGACGGCACGGATTGCACGAGAAACTGAGCGGTATAACCGACAGTTGGCTGAGCAGGAGCGCAGG CTGCGTGAAGTTGGCGAGCGTCAGCGAAAGCTCAACGCCATCAAAGCCAAGGCTGAAAAGACCCGCGAGTTAAGGAACTC TCTGGCAGGTAATGGTGCAGGGGCGATGGCGGCTGGGGTAACTACTGGCATGACGTTGCTGGCTCCAGTAAAAGCCTATT CAGAATCAGAAAATGCAGCGAATCAACTCGCCGGTTCCATGATGGGGCCGGGCGGAAAGGTAGCGCCTGAATTTGAAAAA ATTAACCGGCTTGCAGTTGCTTTGGGTGATAAGCTGCCGGGAACAACAGCCGACTTTCAGAACATGATGACTATGCTACG CCGTCAGGGTATGTCGGCGCAGGTCATCCTGGGAGGCTTGGGAGAGTCAGCAGCTTATCTTGGCGTGCAGTTACAGATGG CTCCCACTGCAGCAGCTGAGTTTGCGGCTAAGTTACAAGATGCTACTCAGACCTCCGAAAAAGACATGATGAATCTGATG GACGTGATCCAGAAAGGATTCTACGCGGGGGTAGATTCAGGAAATATGCTGCAGGGTTTCTCAAAAATCAGCAGCGCGAT GAATATCATCAATAAGAAGGGGTTGGAAGCGGTCAAAACTTTCGCGCCTTTGTTGGTTATGGCTGATCAGGGGAGTATGG CTGGTGAGTCTGCCGGTAATGCATACCGAAAGATTTTTCAGGCCGCTCTGGATGCTGACAATATTAAGGCGGTTAACGAT GACCTGAAAGAAAAGGGCGCGGGTATTAAATTCAACTTCTCTGACGGGAAGGGTGGGTTTGGTGGTCTGGAAAATATGTA TGCCCAGCTGGAGAAACTTAAAAAATTAAATCCAGAAACCCAAATGGCAACCATGAAAGATTTGTTTGGCAATGATGCGG AAACGCTACAAGCGCTGAACATTATGCTATCTAAAGGGATTGAAGGATATAGAGAAACTGCAGCAAAGCTTGAAAATCAG GCATCGCTTAGGGAGCGTGTTGATGCATCGCTGAACACCCTGGGGAATAAATGGGAGGCTGCTACCGGGACATTCACTAA TGCGATGGCGAGTATTGGTGAAACCGTAGCACCTGCATTAAAGAACCTCGCCGATTGGCTGGGGGAGTTAGCCTCTCGTT TGGACGGTTTTGTTAAACGCCATCCCTCGCTTACGTCTGCCTTATTCAAGATGGCTGCAGGATTTGCCGTTGCTGCAACG GCTGTAGGGGCTATCTCTTTGGCGCTGGCATCAATCCTTGGTCCGATGGCAATCATCAGAGTGAGCGCGGGCATGTTGGG CCTGAAGTTTGCGTCGGTGGGTGGCTTGGTTCGTGCTGCGCTGGGAGGGCTCGGGAAATCAGTTTTATGGCTGGGCCGAT TGATGTTTGCAAACCCTATACTGGCTGTCATAGGGCTGATCGCCGCTGGTGCTATTTATATCTGGCAGAACTGGGACACG CTTGGGCCAAAGTTCAAGGCCATGTGGGATGCCGTATGTAATGCCACAGGTACGGCATGGGATTGGATTAAAGAAAAGGC CAGCGCCGCGTGGGAGGGGATTAAGTCACTGTTCTTTAATTATACCTTGCCGGGATTAATAGCTAAAAATTGGGATGCAA TAAAATCTGGCGTTTCTGAGGCGTGGGCCAATATCAGACAATCTATCAGTGATAAATGGAATGCGATCCTGGCTGATGTT TCCGCGCTTCCTGCGAAGTTTCAGGACACGGGCAGCGCCATTATTGACAGCATTCTCGATGGAATTAATGCCAAATGGGA GACACTCAAAAGCAAGCTTTCCTCAGTCACCGATTATCTGCCTGACTGGATGACTGAAAATAATAAAACACAAGACAAAG CACAGGTGCAGGTGGTTGGTGGCGCAGCGGCTGCTGCTGTTCCGTTTGCCGGGATGTATGACAGCGGTGGGATTATTCCG CGCGGTCAGTTCGGTATTGTTGGGGAGAACGGCCCTGAAATTGTGAACGGCCCCGCAAAAGTGACCAGTAGGCGGCGCAC TGCCGCGTTGGCTTCCATCGTTGCAGGTGTCATGGGCGTAGCGGCAGCGCCTGCAGAGGCTGCTCCACTACATCCTTACA GTCTGCCTACTGCGGCATATAAACAAAGCCAGCCTGCGAAATCTGCCAGCGCGCCGCCAGTGATGCACTTTGAAACTCAC GCGCCGATCACTATCTATGCTCAGCCAGGGCAGAGTGCGCAGGATATTGCCCGTGAAGTTGCCCGACAGCTTGACGAACG CGAGCGCAAGACCAGGGCTAAAGCACGCAGTAATTTCAGTGATCAAGGGGGATATGAATAA
Upstream 100 bases:
>100_bases GCCACCATCTTTCACTGGTCGCCGTCCATCACTGACGTTATGCCGCTGACTGATGTGCTGGAGTGGCGGCATAAGGCAAT TCAGAGAAGCGGGGCCAGCG
Downstream 100 bases:
>100_bases TGATGATGGTACTGGGGTTATATGTCTTCATGCTGCGTACAGTGCCATATCAGGAGCTGCAGTATCAGCGAAGCTGGCGA CACGCCGCCAACAGTCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage Tail Tape Measure Protein Family; Bacteriophage P2 Tail Protein GPT; Phage Tail-Like Protein; Bacteriophage Tail Protein; Fels-2 Prophage Protein; Bacteriophage P2 Tail Protein GpT; Tail Length Tape Measure Protein; Phage-Related Tail Protein; Bacteriophage V Tail Protein; Phage-Related Tail Transmembrane Protein; Phage Tail Tape Measure Core Region; Phage Tail Fiber Protein; Bacteriophage Tail Protein/Phage Tail Tape Measure Protein; Tail Length Determinator; Myosin Heavy Chain Striated; Phage TMP Domain-Containing Protein; Prophage Tail Length Determinator; Tail Fiber Protein T; Phage Membrane Protein
Number of amino acids: Translated: 926; Mature: 925
Protein sequence:
>926_residues MSDNNLRLQVVLGAVDKLTRPFKNAQAGSKELASAIRQTRDQIKKLSDAGGQLKSFDQLTQSVSRTGAELDQARLRAQMM TREMSSLESPTKKQTQALEAQWRAVSRLEQKQQQETRQMAAARAELYRLGLSAGGGARETARIARETERYNRQLAEQERR LREVGERQRKLNAIKAKAEKTRELRNSLAGNGAGAMAAGVTTGMTLLAPVKAYSESENAANQLAGSMMGPGGKVAPEFEK INRLAVALGDKLPGTTADFQNMMTMLRRQGMSAQVILGGLGESAAYLGVQLQMAPTAAAEFAAKLQDATQTSEKDMMNLM DVIQKGFYAGVDSGNMLQGFSKISSAMNIINKKGLEAVKTFAPLLVMADQGSMAGESAGNAYRKIFQAALDADNIKAVND DLKEKGAGIKFNFSDGKGGFGGLENMYAQLEKLKKLNPETQMATMKDLFGNDAETLQALNIMLSKGIEGYRETAAKLENQ ASLRERVDASLNTLGNKWEAATGTFTNAMASIGETVAPALKNLADWLGELASRLDGFVKRHPSLTSALFKMAAGFAVAAT AVGAISLALASILGPMAIIRVSAGMLGLKFASVGGLVRAALGGLGKSVLWLGRLMFANPILAVIGLIAAGAIYIWQNWDT LGPKFKAMWDAVCNATGTAWDWIKEKASAAWEGIKSLFFNYTLPGLIAKNWDAIKSGVSEAWANIRQSISDKWNAILADV SALPAKFQDTGSAIIDSILDGINAKWETLKSKLSSVTDYLPDWMTENNKTQDKAQVQVVGGAAAAAVPFAGMYDSGGIIP RGQFGIVGENGPEIVNGPAKVTSRRRTAALASIVAGVMGVAAAPAEAAPLHPYSLPTAAYKQSQPAKSASAPPVMHFETH APITIYAQPGQSAQDIAREVARQLDERERKTRAKARSNFSDQGGYE
Sequences:
>Translated_926_residues MSDNNLRLQVVLGAVDKLTRPFKNAQAGSKELASAIRQTRDQIKKLSDAGGQLKSFDQLTQSVSRTGAELDQARLRAQMM TREMSSLESPTKKQTQALEAQWRAVSRLEQKQQQETRQMAAARAELYRLGLSAGGGARETARIARETERYNRQLAEQERR LREVGERQRKLNAIKAKAEKTRELRNSLAGNGAGAMAAGVTTGMTLLAPVKAYSESENAANQLAGSMMGPGGKVAPEFEK INRLAVALGDKLPGTTADFQNMMTMLRRQGMSAQVILGGLGESAAYLGVQLQMAPTAAAEFAAKLQDATQTSEKDMMNLM DVIQKGFYAGVDSGNMLQGFSKISSAMNIINKKGLEAVKTFAPLLVMADQGSMAGESAGNAYRKIFQAALDADNIKAVND DLKEKGAGIKFNFSDGKGGFGGLENMYAQLEKLKKLNPETQMATMKDLFGNDAETLQALNIMLSKGIEGYRETAAKLENQ ASLRERVDASLNTLGNKWEAATGTFTNAMASIGETVAPALKNLADWLGELASRLDGFVKRHPSLTSALFKMAAGFAVAAT AVGAISLALASILGPMAIIRVSAGMLGLKFASVGGLVRAALGGLGKSVLWLGRLMFANPILAVIGLIAAGAIYIWQNWDT LGPKFKAMWDAVCNATGTAWDWIKEKASAAWEGIKSLFFNYTLPGLIAKNWDAIKSGVSEAWANIRQSISDKWNAILADV SALPAKFQDTGSAIIDSILDGINAKWETLKSKLSSVTDYLPDWMTENNKTQDKAQVQVVGGAAAAAVPFAGMYDSGGIIP RGQFGIVGENGPEIVNGPAKVTSRRRTAALASIVAGVMGVAAAPAEAAPLHPYSLPTAAYKQSQPAKSASAPPVMHFETH APITIYAQPGQSAQDIAREVARQLDERERKTRAKARSNFSDQGGYE >Mature_925_residues SDNNLRLQVVLGAVDKLTRPFKNAQAGSKELASAIRQTRDQIKKLSDAGGQLKSFDQLTQSVSRTGAELDQARLRAQMMT REMSSLESPTKKQTQALEAQWRAVSRLEQKQQQETRQMAAARAELYRLGLSAGGGARETARIARETERYNRQLAEQERRL REVGERQRKLNAIKAKAEKTRELRNSLAGNGAGAMAAGVTTGMTLLAPVKAYSESENAANQLAGSMMGPGGKVAPEFEKI NRLAVALGDKLPGTTADFQNMMTMLRRQGMSAQVILGGLGESAAYLGVQLQMAPTAAAEFAAKLQDATQTSEKDMMNLMD VIQKGFYAGVDSGNMLQGFSKISSAMNIINKKGLEAVKTFAPLLVMADQGSMAGESAGNAYRKIFQAALDADNIKAVNDD LKEKGAGIKFNFSDGKGGFGGLENMYAQLEKLKKLNPETQMATMKDLFGNDAETLQALNIMLSKGIEGYRETAAKLENQA SLRERVDASLNTLGNKWEAATGTFTNAMASIGETVAPALKNLADWLGELASRLDGFVKRHPSLTSALFKMAAGFAVAATA VGAISLALASILGPMAIIRVSAGMLGLKFASVGGLVRAALGGLGKSVLWLGRLMFANPILAVIGLIAAGAIYIWQNWDTL GPKFKAMWDAVCNATGTAWDWIKEKASAAWEGIKSLFFNYTLPGLIAKNWDAIKSGVSEAWANIRQSISDKWNAILADVS ALPAKFQDTGSAIIDSILDGINAKWETLKSKLSSVTDYLPDWMTENNKTQDKAQVQVVGGAAAAAVPFAGMYDSGGIIPR GQFGIVGENGPEIVNGPAKVTSRRRTAALASIVAGVMGVAAAPAEAAPLHPYSLPTAAYKQSQPAKSASAPPVMHFETHA PITIYAQPGQSAQDIAREVARQLDERERKTRAKARSNFSDQGGYE
Specific function: Unknown
COG id: COG5283
COG function: function code S; Phage-related tail protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99005; Mature: 98874
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNNLRLQVVLGAVDKLTRPFKNAQAGSKELASAIRQTRDQIKKLSDAGGQLKSFDQLT CCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QSVSRTGAELDQARLRAQMMTREMSSLESPTKKQTQALEAQWRAVSRLEQKQQQETRQMA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARAELYRLGLSAGGGARETARIARETERYNRQLAEQERRLREVGERQRKLNAIKAKAEK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRELRNSLAGNGAGAMAAGVTTGMTLLAPVKAYSESENAANQLAGSMMGPGGKVAPEFEK HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHH INRLAVALGDKLPGTTADFQNMMTMLRRQGMSAQVILGGLGESAAYLGVQLQMAPTAAAE HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHEEEEEECHHHHHH FAAKLQDATQTSEKDMMNLMDVIQKGFYAGVDSGNMLQGFSKISSAMNIINKKGLEAVKT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FAPLLVMADQGSMAGESAGNAYRKIFQAALDADNIKAVNDDLKEKGAGIKFNFSDGKGGF HHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCC GGLENMYAQLEKLKKLNPETQMATMKDLFGNDAETLQALNIMLSKGIEGYRETAAKLENQ CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH ASLRERVDASLNTLGNKWEAATGTFTNAMASIGETVAPALKNLADWLGELASRLDGFVKR HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HPSLTSALFKMAAGFAVAATAVGAISLALASILGPMAIIRVSAGMLGLKFASVGGLVRAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGLGKSVLWLGRLMFANPILAVIGLIAAGAIYIWQNWDTLGPKFKAMWDAVCNATGTAW HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCHH DWIKEKASAAWEGIKSLFFNYTLPGLIAKNWDAIKSGVSEAWANIRQSISDKWNAILADV HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALPAKFQDTGSAIIDSILDGINAKWETLKSKLSSVTDYLPDWMTENNKTQDKAQVQVVG HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEC GAAAAAVPFAGMYDSGGIIPRGQFGIVGENGPEIVNGPAKVTSRRRTAALASIVAGVMGV CHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AAAPAEAAPLHPYSLPTAAYKQSQPAKSASAPPVMHFETHAPITIYAQPGQSAQDIAREV HCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHH ARQLDERERKTRAKARSNFSDQGGYE HHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SDNNLRLQVVLGAVDKLTRPFKNAQAGSKELASAIRQTRDQIKKLSDAGGQLKSFDQLT CCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QSVSRTGAELDQARLRAQMMTREMSSLESPTKKQTQALEAQWRAVSRLEQKQQQETRQMA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARAELYRLGLSAGGGARETARIARETERYNRQLAEQERRLREVGERQRKLNAIKAKAEK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRELRNSLAGNGAGAMAAGVTTGMTLLAPVKAYSESENAANQLAGSMMGPGGKVAPEFEK HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHH INRLAVALGDKLPGTTADFQNMMTMLRRQGMSAQVILGGLGESAAYLGVQLQMAPTAAAE HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHEEEEEECHHHHHH FAAKLQDATQTSEKDMMNLMDVIQKGFYAGVDSGNMLQGFSKISSAMNIINKKGLEAVKT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FAPLLVMADQGSMAGESAGNAYRKIFQAALDADNIKAVNDDLKEKGAGIKFNFSDGKGGF HHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCC GGLENMYAQLEKLKKLNPETQMATMKDLFGNDAETLQALNIMLSKGIEGYRETAAKLENQ CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH ASLRERVDASLNTLGNKWEAATGTFTNAMASIGETVAPALKNLADWLGELASRLDGFVKR HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HPSLTSALFKMAAGFAVAATAVGAISLALASILGPMAIIRVSAGMLGLKFASVGGLVRAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGLGKSVLWLGRLMFANPILAVIGLIAAGAIYIWQNWDTLGPKFKAMWDAVCNATGTAW HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCHH DWIKEKASAAWEGIKSLFFNYTLPGLIAKNWDAIKSGVSEAWANIRQSISDKWNAILADV HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALPAKFQDTGSAIIDSILDGINAKWETLKSKLSSVTDYLPDWMTENNKTQDKAQVQVVG HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEC GAAAAAVPFAGMYDSGGIIPRGQFGIVGENGPEIVNGPAKVTSRRRTAALASIVAGVMGV CHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AAAPAEAAPLHPYSLPTAAYKQSQPAKSASAPPVMHFETHAPITIYAQPGQSAQDIAREV HCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHH ARQLDERERKTRAKARSNFSDQGGYE HHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA