Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29144551
Identifier: 29144551
GI number: 29144551
Start: 4459412
End: 4459897
Strand: Reverse
Name: 29144551
Synonym: t4296
Alternate gene names: NA
Gene position: 4459897-4459412 (Counterclockwise)
Preceding gene: 29144552
Following gene: 29144550
Centisome position: 93.07
GC content: 52.06
Gene sequence:
>486_bases ATGATGATGGTACTGGGGTTATATGTCTTCATGCTGCGTACAGTGCCATATCAGGAGCTGCAGTATCAGCGAAGCTGGCG ACACGCCGCCAACAGTCGGGTGAACCGGCGACCATCAACGCAGTTTCTTGGCCCGGATAATGACCCGCTGACGTTATCTG GCGTACTGCTGCCGGAAGTCACCGGCGGCAGGCTGTCATTGCTGGCACTTGAGCAAATGGCAGAGCTTGGCAAAGCATGG CCCCTGATTGAGGGAAGTGGGACCATTTACGGCATGTTTGTGATCGAGAGCCTGAGTCAGACAAAAACAGAGTTTTTTGA AAGCGGAATGTCTCGCCGTATTGAGTTTACGCTGACCCTGAAAAGGGTTGATGAGTCGCTGTCTGATATGTTCGGCAGTC TCAGCGATCAGCTCAGTAACCTGCAGGACTCTGCAACGTCTGCGATAGGTAATATTAAAAATACGGTTGGAGGGTTGCTG CAGTGA
Upstream 100 bases:
>100_bases AGGATATTGCCCGTGAAGTTGCCCGACAGCTTGACGAACGCGAGCGCAAGACCAGGGCTAAAGCACGCAGTAATTTCAGT GATCAAGGGGGATATGAATA
Downstream 100 bases:
>100_bases ATTTTAGCTCTGATCTTTTTGGCCTGAACAGCAGAAGCCCGGCTTTCAGTATCACTATTGAAGGTAAGGACGTGACCACC GCGCTGGATGCGCGCCTGAT
Product: phage tail protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Phage Protein U; Fels-2 Prophage Protein; Phage Tail Protein U; Tail Fiber Protein; Phage-Related Protein; Phage Tail Assembly Protein; Tail Fiber Protein Of Prophage; Bacteriophage Tail Fiber Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Bacteriophage P2 Tail Protein GPU; Phage Tail; Tail Protein; Phage-Like Tail Protein; Tail Protein U; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDPLTLSGVLLPEVTGGRLSLLALEQMAELGKAW PLIEGSGTIYGMFVIESLSQTKTEFFESGMSRRIEFTLTLKRVDESLSDMFGSLSDQLSNLQDSATSAIGNIKNTVGGLL Q
Sequences:
>Translated_161_residues MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDPLTLSGVLLPEVTGGRLSLLALEQMAELGKAW PLIEGSGTIYGMFVIESLSQTKTEFFESGMSRRIEFTLTLKRVDESLSDMFGSLSDQLSNLQDSATSAIGNIKNTVGGLL Q >Mature_161_residues MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDPLTLSGVLLPEVTGGRLSLLALEQMAELGKAW PLIEGSGTIYGMFVIESLSQTKTEFFESGMSRRIEFTLTLKRVDESLSDMFGSLSDQLSNLQDSATSAIGNIKNTVGGLL Q
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17913; Mature: 17913
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDPLTLSGVLLPEV CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCC TGGRLSLLALEQMAELGKAWPLIEGSGTIYGMFVIESLSQTKTEFFESGMSRRIEFTLTL CCCHHHHHHHHHHHHHHHHCCEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEEEHH KRVDESLSDMFGSLSDQLSNLQDSATSAIGNIKNTVGGLLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDPLTLSGVLLPEV CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCC TGGRLSLLALEQMAELGKAWPLIEGSGTIYGMFVIESLSQTKTEFFESGMSRRIEFTLTL CCCHHHHHHHHHHHHHHHHCCEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEEEHH KRVDESLSDMFGSLSDQLSNLQDSATSAIGNIKNTVGGLLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA