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The map label for this gene is pilS

Identifier: 29144504

GI number: 29144504

Start: 4416557

End: 4417192

Strand: Direct

Name: pilS

Synonym: t4247

Alternate gene names: NA

Gene position: 4416557-4417192 (Clockwise)

Preceding gene: 29144503

Following gene: 29144505

Centisome position: 92.17

GC content: 51.1

Gene sequence:

>636_bases
ATGTTAAGCAATTCAATGAAAAATGAAACAGAGGGAAAGATGATGAATGAGGTATCAACATTAAATCCATGCAACAGGCC
TGACCGGGGAATGTCGGCAGATGCCGGTGCCACTGCACTGTTTATTCTGGTGATCATTGGGGTGATAGCCGCGGCGGTCT
GGTCGATGTGGGGTAAAAAGGATGCGGGTACGGAGCTGACAAACTATCAGACCCTGGCCACGAACACCATTGGCATGATG
AAAGGCGTTGACGGTTATGCTTTTACCAGTGGCGCTAAAATGACCGACACGTTAATTCAGGCCGGGGCGGCAAAAGGGAT
GACGGTCAGTGGAGACCCTGCTTCCGGTTCCGCGACACTGTGGAACTCATGGGGTGGCCAGATTGTGGTGGCGCCGGATA
CAGCGGGGGGAACCGGATTTAATAATGGGTTCACCATTACCACAAACAAAGTTCCGCAATCTGCCTGCGTATCCATTTCA
ACAGGTATGAGCCGTTCAGGCGGCACGTCCGGTATTAAAATAAACGGCAATAACCACACCGATGCGAAAGTAACGGCAGA
AATCGCGAGCAGTGAATGCACTGCAGATAATGGCCGGACCGGTACCAATACGCTGGTTTTTAACTACAACGGCTGA

Upstream 100 bases:

>100_bases
TGATGCTGTTCTCAATGGTGATGTTATTTGCGCTTATTGGCGTTGTGGTCGTGGCGGTGATTGAGGCGACTTCGATGACC
GAGAGTATGGGGCAGTACTG

Downstream 100 bases:

>100_bases
GGAGGCGGGATGTGTGGATATTTTTCCCGACTGGCTTTATTCATGACGCTGTGCAGTGTGCCGCTGTGGGTACAGGCATT
CTGCTTTGATGCCGCTGCGG

Product: prepilin

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein; TypeIV Prepilin; Type IV Prepilin Cluster; Prepilin; PilS Protein; PilS Type IV Pilus Prepilin

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLSNSMKNETEGKMMNEVSTLNPCNRPDRGMSADAGATALFILVIIGVIAAAVWSMWGKKDAGTELTNYQTLATNTIGMM
KGVDGYAFTSGAKMTDTLIQAGAAKGMTVSGDPASGSATLWNSWGGQIVVAPDTAGGTGFNNGFTITTNKVPQSACVSIS
TGMSRSGGTSGIKINGNNHTDAKVTAEIASSECTADNGRTGTNTLVFNYNG

Sequences:

>Translated_211_residues
MLSNSMKNETEGKMMNEVSTLNPCNRPDRGMSADAGATALFILVIIGVIAAAVWSMWGKKDAGTELTNYQTLATNTIGMM
KGVDGYAFTSGAKMTDTLIQAGAAKGMTVSGDPASGSATLWNSWGGQIVVAPDTAGGTGFNNGFTITTNKVPQSACVSIS
TGMSRSGGTSGIKINGNNHTDAKVTAEIASSECTADNGRTGTNTLVFNYNG
>Mature_211_residues
MLSNSMKNETEGKMMNEVSTLNPCNRPDRGMSADAGATALFILVIIGVIAAAVWSMWGKKDAGTELTNYQTLATNTIGMM
KGVDGYAFTSGAKMTDTLIQAGAAKGMTVSGDPASGSATLWNSWGGQIVVAPDTAGGTGFNNGFTITTNKVPQSACVSIS
TGMSRSGGTSGIKINGNNHTDAKVTAEIASSECTADNGRTGTNTLVFNYNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21641; Mature: 21641

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNSMKNETEGKMMNEVSTLNPCNRPDRGMSADAGATALFILVIIGVIAAAVWSMWGKK
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQAGAAKGMTVSGDPASGSATL
CCCCCCCCEEEHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCEECCCCCCCCEEE
WNSWGGQIVVAPDTAGGTGFNNGFTITTNKVPQSACVSISTGMSRSGGTSGIKINGNNHT
EECCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEECCCCCC
DAKVTAEIASSECTADNGRTGTNTLVFNYNG
CCEEEEEECCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MLSNSMKNETEGKMMNEVSTLNPCNRPDRGMSADAGATALFILVIIGVIAAAVWSMWGKK
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQAGAAKGMTVSGDPASGSATL
CCCCCCCCEEEHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCEECCCCCCCCEEE
WNSWGGQIVVAPDTAGGTGFNNGFTITTNKVPQSACVSISTGMSRSGGTSGIKINGNNHT
EECCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEECCCCCC
DAKVTAEIASSECTADNGRTGTNTLVFNYNG
CCEEEEEECCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA