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The map label for this gene is yjjQ [C]

Identifier: 29144480

GI number: 29144480

Start: 4389719

End: 4390006

Strand: Reverse

Name: yjjQ [C]

Synonym: t4220

Alternate gene names: 29144480

Gene position: 4390006-4389719 (Counterclockwise)

Preceding gene: 29144481

Following gene: 29144479

Centisome position: 91.61

GC content: 29.51

Gene sequence:

>288_bases
TTGAGATATCTGACAATGCAGTATAAGAACAAAGCAAAACATATTAATATAAGAGATGGAATTCTGTTGCTCGCTAAAAA
ATTCGATCTAACATTGAGCGAGAAAAAAGTTATTTATTACGTGGCTGCAGGATTATCTGTTAAAAGTTGCTCAAATTTAT
TAGATCGAAATATAAAAACGATTTCAACACAAAAGAGATCAGCCTATAAAAAAATGGATATTACTACTGATGTTGAATTA
ATCCATTTGATGCTGAATGAGTTTTACATATCAGTCGATATTACGTAA

Upstream 100 bases:

>100_bases
ATAGTGCTTCTTATTTTACATGCGTTTTTAAAAAACATTTCAAAACTACACCATCGGAATTTTTAGCGTTTTTATCCTCC
TCTCGTCATCAATATGTTAA

Downstream 100 bases:

>100_bases
TTTTTTCTAAAATGTTGCTAGAATGGTAGGCAAGGCAACTCTGGATATCATCTTCAGAGATCGTTCCGCAAACGCTATGG
ATAATTCTTCGCTGTCTATC

Product: GerE family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MRYLTMQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSCSNLLDRNIKTISTQKRSAYKKMDITTDVEL
IHLMLNEFYISVDIT

Sequences:

>Translated_95_residues
MRYLTMQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSCSNLLDRNIKTISTQKRSAYKKMDITTDVEL
IHLMLNEFYISVDIT
>Mature_95_residues
MRYLTMQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSCSNLLDRNIKTISTQKRSAYKKMDITTDVEL
IHLMLNEFYISVDIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11033; Mature: 11033

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLTMQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSCSNLLDRNIKT
CCEEEEEECCCCCEEECCCCEEEEEEECCCEECCCEEEEEEECCCCHHHHHHHHHCCCCE
ISTQKRSAYKKMDITTDVELIHLMLNEFYISVDIT
ECCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEC
>Mature Secondary Structure
MRYLTMQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSCSNLLDRNIKT
CCEEEEEECCCCCEEECCCCEEEEEEECCCEECCCEEEEEEECCCCHHHHHHHHHCCCCE
ISTQKRSAYKKMDITTDVELIHLMLNEFYISVDIT
ECCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA