Click here to switch to the map view.

The map label for this gene is yjbR [H]

Identifier: 29144419

GI number: 29144419

Start: 4301718

End: 4302074

Strand: Direct

Name: yjbR [H]

Synonym: t4157

Alternate gene names: 29144419

Gene position: 4301718-4302074 (Clockwise)

Preceding gene: 29144418

Following gene: 29144423

Centisome position: 89.77

GC content: 51.82

Gene sequence:

>357_bases
ATGACCATTTCGGAATTACTGCAATACTGCATGGCAAAACCTGGCGCAGAGCAGAGCGTTCACAGCGACTGGAAAGCGAC
GCAAATTAAAGTGGAAGATGTACTTTTCGCGATGGTAAAAGAAGTTGATGGGCGCCCGGCAGCCTCTCTCAAAACCAGCC
CGGAACTGGCAGAGTTGTTACGCCAGCAGCACAGCGATGTTCGATCGAGTCGGCACCTTAATAAAGCGCACTGGAGTACG
GTCTATCTGGACGGCTCGCTGCCGGATTCACAACTCTATTATCTGGTCGATGCCTCTTATCAACAGGCGGTAAATGCGCT
GTCGGAAGATAAACGCAAGCAGTTGCCGCAGTCCTGA

Upstream 100 bases:

>100_bases
GGCGTTTACAGTTAGGAACATGGCAAGGTATCTGGTTGGGAGAGCACCGTATTCACGGCGGTCCACGTAAAATCATCGCG
ACACTACAAGGGGAATGATA

Downstream 100 bases:

>100_bases
TTATAGCGCGCCGACCAACAACGCCAGGGCGATATCAATGAGGTGGATGACCGTAGACCGGATACGGCTGCCGAGGGCAA
TTTGCGCATTATTGGCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTISELLQYCMAKPGAEQSVHSDWKATQIKVEDVLFAMVKEVDGRPAASLKTSPELAELLRQQHSDVRSSRHLNKAHWST
VYLDGSLPDSQLYYLVDASYQQAVNALSEDKRKQLPQS

Sequences:

>Translated_118_residues
MTISELLQYCMAKPGAEQSVHSDWKATQIKVEDVLFAMVKEVDGRPAASLKTSPELAELLRQQHSDVRSSRHLNKAHWST
VYLDGSLPDSQLYYLVDASYQQAVNALSEDKRKQLPQS
>Mature_117_residues
TISELLQYCMAKPGAEQSVHSDWKATQIKVEDVLFAMVKEVDGRPAASLKTSPELAELLRQQHSDVRSSRHLNKAHWSTV
YLDGSLPDSQLYYLVDASYQQAVNALSEDKRKQLPQS

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367342, Length=117, Percent_Identity=90.5982905982906, Blast_Score=219, Evalue=4e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 13304; Mature: 13173

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISELLQYCMAKPGAEQSVHSDWKATQIKVEDVLFAMVKEVDGRPAASLKTSPELAELL
CCHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
RQQHSDVRSSRHLNKAHWSTVYLDGSLPDSQLYYLVDASYQQAVNALSEDKRKQLPQS
HHHHHHHHHHHCCCHHHCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TISELLQYCMAKPGAEQSVHSDWKATQIKVEDVLFAMVKEVDGRPAASLKTSPELAELL
CHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
RQQHSDVRSSRHLNKAHWSTVYLDGSLPDSQLYYLVDASYQQAVNALSEDKRKQLPQS
HHHHHHHHHHHCCCHHHCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]