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The map label for this gene is yjbQ

Identifier: 29144418

GI number: 29144418

Start: 4301299

End: 4301715

Strand: Direct

Name: yjbQ

Synonym: t4156

Alternate gene names: 29144418

Gene position: 4301299-4301715 (Clockwise)

Preceding gene: 29144417

Following gene: 29144419

Centisome position: 89.76

GC content: 51.32

Gene sequence:

>417_bases
ATGTGGTATCAGCGCACCATTACACTGAGCGAGAAGCCGCGCGGGTTTCATCTAATAACAGATGAAATTACCGATAAATT
GTCTGGCTTACCGCCTGTCGAAACGGGTTTGCTGCATCTGTTGTTGCTACATACCTCGGCCTCGCTGACGTTAAACGAAA
ACTGCGATCCCACCGTGCGCGCTGATATGGAGCGCCATTTCCTGAAAACCGTTCCCGATAATGCGGCGTATGAACATGAT
TACGAAGGGGCGGATGACATGCCTTCGCATATTAAGTCGTCAGTATTGGGCGTCTCGTTGCTGCTGCCTGTACGCCAGGG
GCGTTTACAGTTAGGAACATGGCAAGGTATCTGGTTGGGAGAGCACCGTATTCACGGCGGTCCACGTAAAATCATCGCGA
CACTACAAGGGGAATGA

Upstream 100 bases:

>100_bases
TTTGCATGATTTTTGCACAAACTTGCCCCGCTGGCTTTTACCTTTTCCAGACTTGCTGCACACTATTCAGGAGACGTTTG
TTTTTAGGAAGGAGCAGCCT

Downstream 100 bases:

>100_bases
TAATGACCATTTCGGAATTACTGCAATACTGCATGGCAAAACCTGGCGCAGAGCAGAGCGTTCACAGCGACTGGAAAGCG
ACGCAAATTAAAGTGGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MWYQRTITLSEKPRGFHLITDEITDKLSGLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPDNAAYEHD
YEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQGE

Sequences:

>Translated_138_residues
MWYQRTITLSEKPRGFHLITDEITDKLSGLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPDNAAYEHD
YEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQGE
>Mature_138_residues
MWYQRTITLSEKPRGFHLITDEITDKLSGLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPDNAAYEHD
YEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family

Homologues:

Organism=Escherichia coli, GI1790491, Length=138, Percent_Identity=78.9855072463768, Blast_Score=233, Evalue=4e-63,
Organism=Drosophila melanogaster, GI221476594, Length=136, Percent_Identity=51.4705882352941, Blast_Score=149, Evalue=5e-37,
Organism=Drosophila melanogaster, GI221476589, Length=136, Percent_Identity=51.4705882352941, Blast_Score=148, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJBQ_SALTI (P0A2L2)

Other databases:

- EMBL:   AJ237788
- EMBL:   AL627282
- EMBL:   AE014613
- RefSeq:   NP_458548.1
- RefSeq:   NP_807760.1
- ProteinModelPortal:   P0A2L2
- SMR:   P0A2L2
- PRIDE:   P0A2L2
- GeneID:   1069738
- GeneID:   1250663
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t4156
- KEGG:   sty:STY4446
- HOGENOM:   HBG409904
- OMA:   IIQENAD
- ProtClustDB:   CLSK2753107
- BioCyc:   SENT209261:T4156-MONOMER
- BioCyc:   SENT220341:STY4446-MONOMER
- InterPro:   IPR001602
- Gene3D:   G3DSA:2.60.120.460
- PIRSF:   PIRSF004681
- TIGRFAMs:   TIGR00149

Pfam domain/function: PF01894 UPF0047; SSF111038 UPF0047

EC number: NA

Molecular weight: Translated: 15484; Mature: 15484

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYQRTITLSEKPRGFHLITDEITDKLSGLPPVETGLLHLLLLHTSASLTLNENCDPTVR
CCCEEEEEECCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHH
ADMERHFLKTVPDNAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLG
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCEEEECCCCCEEEC
EHRIHGGPRKIIATLQGE
CCEECCCCEEEEEEECCC
>Mature Secondary Structure
MWYQRTITLSEKPRGFHLITDEITDKLSGLPPVETGLLHLLLLHTSASLTLNENCDPTVR
CCCEEEEEECCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHH
ADMERHFLKTVPDNAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLG
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCEEEECCCCCEEEC
EHRIHGGPRKIIATLQGE
CCEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10564784; 11677608; 12644504