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The map label for this gene is yjbH [H]

Identifier: 29144393

GI number: 29144393

Start: 4273704

End: 4275800

Strand: Direct

Name: yjbH [H]

Synonym: t4131

Alternate gene names: 29144393

Gene position: 4273704-4275800 (Clockwise)

Preceding gene: 29144392

Following gene: 29144394

Centisome position: 89.18

GC content: 54.08

Gene sequence:

>2097_bases
ATGAAAAAAACACATCTGCTCAGCGTGCTGGCGCTGGGTATTAGCGCGGCCTGCCATGCCGAAACATATCCAGCCCCTGT
TGGGCCTTCACAATCTGACTTTGGCGGCGTGGGCCTGCTGCAAACGCCGACAGCGCGTATGGCGCGTGAAGGGGAGATGA
GCCTGAACTATCGCGATAACGATCAGTACCGCTACTACTCGGCTTCGGTTCAGCTTTTCCCGTGGCTGGAAACCACGTTG
CGCTATACCGATGTCCGTACGAAAAAGTACAGCAGCGTGGAATCATTCTCCGGCGACCAGACTTACAAAGATAAAGCGTT
TGATGTGAAACTGCGGTTGTGGGAAGAGAGTTACTGGATGCCGCAGGTGGCGGTTGGCGCGCGCGATATCGGCGGGACGG
GGCTGTTTGATGCGGAATATATTGTAGCGAGTAAGGCTTGGGGGCCATTTGATTTTTCATTAGGTCTCGGCTGGGGCTAT
CTTGGCACCAGCGGCAATGTGTCTAATCCTTTCTGTTCGTATAGTGATAAATTCTGTTCGCGTGATAACAGCTATAAAGA
GGCCGGTTCCGTCGACGGTAGCGATATGTTTCACGGCCCGGCTTCGCTGTTTGGCGGCGTGGAATACCAGACCCCGTGGC
AACCGCTACGCCTGAAGCTGGAGTATGAAGGCAATAACTATCAGCAGGATTTTGCGGGGAAACTGGAACAGAAGAGCAAG
TTTAACGTCGGCGCCATTTACTGCGTCACCGATTGGGCCGACGTTAACCTCAGCTACGAGCGCGGCAACACCTTTATGTT
TGGCGTTACGCTGCGCACCAATTTCAACGATTTACGTCCCGCGTATCATGACAATTCACGCCCGCAATACCGACCACAGC
CGCAGGATGCCATCCTGCAACATTCGGTAGTGGCTAATCAATTAACGTTATTGAAATATAATGCCGGTCTGGCGGACCCG
AAAATCCAGGTCAAAGGCGATACGCTATACGTTACCGGTGAACAGGTGAAGTACCGCGACTCCCGTGAGGGGATCGTGCG
CGCTAACCGGATCGTCATGAACGATCTGCCGGAGGGGATCCGCACGATCCGCGTGACGGAAAACCGCCTTAATCTGCCGC
AGGTCACCACTGAAACCGATGTCGCCAGCCTGAAACGCCATCTGGAAGGCGAACCGCTGGGACATGAAACTCCGCTGGCG
CAAAAACGCGTGGAGCCGATCGTGCCAGAGAGTACTGAACAGGGTTGGTATATCGACAAGTCGCGCATTGATTTTCATCT
TGATCCCGTGCTGAATCAGTCGGTAGGCGGCCCGGAAAACTTCTATATGTATCAGTTGGGCGTAATGGGAACTGCGGATC
TGTGGGTCACGGATCATCTGCTCACCACGGGCAGCGTGTTTGCCAATATCGCCAACAACTACGACAAATTTAACTACACC
AATCCACCGAAGGACTCGCATCTGCCGCGGGTGCGTACGCATGTCCGTGAGTATGTGCAGAATGATGTTTATGTGAATAA
CCTACAGGCCAACTACTTCCAGTATTTTGGCAATGGTTTCTATGGGCAGGTCTATGGCGGTTATCTGGAGACCATGTTTG
GCGGTGCCGGGGCGGAAGTCCTGTATCGCCCGGTAGACAGCAATTGGGCGTTTGGTCTGGATGCCAACTACGTGAAACAG
CGTGACTGGCGTAGCGCGCAGGATATGATGAAGTTTACCGATTACAGCGTGAAGACCGGACATTTGACCGCATACTGGAC
GCCGTCGTTCGCCCAGGATGTGCTGGTGAAAGCCAGCGTTGGTCAGTATCTGGCGGGCGATAAAGGCGGTACGCTGGAGA
TCGCCAAACGCTTCGATAGCGGCGTCGTTGTCGGCGGTTACGCGACGATTACCGATGCGTCGCCGGATGAATATGGGGAA
GGGGATTTTACCAAAGGCGTATATGTTTCCGTACCGCTGGATCTCTTCTCGTCCGGCCCAACCCGAAGTCGTGCGGCAAT
TGGCTGGACGCCGCTGACGCGTGACGGTGGTCAACAGCTTGGCCGTAAGTTTGGCCTGTATGATATGACCAGTGACAGGA
GCGTAAATTTCCGTTAA

Upstream 100 bases:

>100_bases
GCATCATTTTTGTCGGTTTTGCCGATTCCCTTTGGCGCGGCACGCCGGAGGCGATAAATGCCGACATTCTTCATACCCTG
ACGCAGCGGATACCGGAATA

Downstream 100 bases:

>100_bases
TACTCAGGCCGGATAAGGCGTTCACGGCGCTATCCGGCAAATTACCTTATTGAACAAAATATAAACACAAATAAAAAATA
TAGATGCCCGTCACATTTGT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPTARMAREGEMSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTKKYSSVESFSGDQTYKDKAFDVKLRLWEESYWMPQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGY
LGTSGNVSNPFCSYSDKFCSRDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYCVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPAYHDNSRPQYRPQPQDAILQHSVVANQLTLLKYNAGLADP
KIQVKGDTLYVTGEQVKYRDSREGIVRANRIVMNDLPEGIRTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETPLA
QKRVEPIVPESTEQGWYIDKSRIDFHLDPVLNQSVGGPENFYMYQLGVMGTADLWVTDHLLTTGSVFANIANNYDKFNYT
NPPKDSHLPRVRTHVREYVQNDVYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEVLYRPVDSNWAFGLDANYVKQ
RDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITDASPDEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFGLYDMTSDRSVNFR

Sequences:

>Translated_698_residues
MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPTARMAREGEMSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTKKYSSVESFSGDQTYKDKAFDVKLRLWEESYWMPQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGY
LGTSGNVSNPFCSYSDKFCSRDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYCVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPAYHDNSRPQYRPQPQDAILQHSVVANQLTLLKYNAGLADP
KIQVKGDTLYVTGEQVKYRDSREGIVRANRIVMNDLPEGIRTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETPLA
QKRVEPIVPESTEQGWYIDKSRIDFHLDPVLNQSVGGPENFYMYQLGVMGTADLWVTDHLLTTGSVFANIANNYDKFNYT
NPPKDSHLPRVRTHVREYVQNDVYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEVLYRPVDSNWAFGLDANYVKQ
RDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITDASPDEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFGLYDMTSDRSVNFR
>Mature_698_residues
MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPTARMAREGEMSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTKKYSSVESFSGDQTYKDKAFDVKLRLWEESYWMPQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGY
LGTSGNVSNPFCSYSDKFCSRDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYCVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPAYHDNSRPQYRPQPQDAILQHSVVANQLTLLKYNAGLADP
KIQVKGDTLYVTGEQVKYRDSREGIVRANRIVMNDLPEGIRTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETPLA
QKRVEPIVPESTEQGWYIDKSRIDFHLDPVLNQSVGGPENFYMYQLGVMGTADLWVTDHLLTTGSVFANIANNYDKFNYT
NPPKDSHLPRVRTHVREYVQNDVYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEVLYRPVDSNWAFGLDANYVKQ
RDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITDASPDEYGE
GDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFGLYDMTSDRSVNFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcA [H]

Homologues:

Organism=Escherichia coli, GI1790461, Length=698, Percent_Identity=92.2636103151863, Blast_Score=1362, Evalue=0.0,
Organism=Escherichia coli, GI1787219, Length=696, Percent_Identity=63.5057471264368, Blast_Score=940, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 78303; Mature: 78303

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPTARMAREGEMSLNYRDN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCEEEEECCC
DQYRYYSASVQLFPWLETTLRYTDVRTKKYSSVESFSGDQTYKDKAFDVKLRLWEESYWM
CCEEEEEEEEEEEECHHHHHHHHHCCHHHHCCHHHCCCCCCCCCCEEEEEEEEECCCCCC
PQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGYLGTSGNVSNPFCSYSDKFCS
CEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEECCCCCCCCCCCCCCCHHHHC
RDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
CCCCCHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC
FNVGAIYCVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPAYHDNSRPQYRPQPQDAILQ
CCCEEEEEEECCEEEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
HSVVANQLTLLKYNAGLADPKIQVKGDTLYVTGEQVKYRDSREGIVRANRIVMNDLPEGI
HHHHHCEEEEEEECCCCCCCEEEEECCEEEEECCCEEECCCCCCHHHHCCHHHHCCCCCC
RTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETPLAQKRVEPIVPESTEQGWYIDK
EEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEC
SRIDFHLDPVLNQSVGGPENFYMYQLGVMGTADLWVTDHLLTTGSVFANIANNYDKFNYT
CCCEEEECCHHHCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCC
NPPKDSHLPRVRTHVREYVQNDVYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEV
CCCCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHCCCEEEEHHHHHHHHHHCCCCCEE
LYRPVDSNWAFGLDANYVKQRDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV
EEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCHHHHHHHHHHHH
GQYLAGDKGGTLEIAKRFDSGVVVGGYATITDASPDEYGEGDFTKGVYVSVPLDLFSSGP
CHHHCCCCCCEEHHHHHCCCCEEECCEEEEECCCCCCCCCCCCCCCEEEEECHHHHCCCC
TRSRAAIGWTPLTRDGGQQLGRKFGLYDMTSDRSVNFR
CCCCEEECCCCCCCCHHHHHHHHCCCEECCCCCCCCCC
>Mature Secondary Structure
MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPTARMAREGEMSLNYRDN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCEEEEECCC
DQYRYYSASVQLFPWLETTLRYTDVRTKKYSSVESFSGDQTYKDKAFDVKLRLWEESYWM
CCEEEEEEEEEEEECHHHHHHHHHCCHHHHCCHHHCCCCCCCCCCEEEEEEEEECCCCCC
PQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGYLGTSGNVSNPFCSYSDKFCS
CEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEECCCCCCCCCCCCCCCHHHHC
RDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
CCCCCHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC
FNVGAIYCVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPAYHDNSRPQYRPQPQDAILQ
CCCEEEEEEECCEEEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
HSVVANQLTLLKYNAGLADPKIQVKGDTLYVTGEQVKYRDSREGIVRANRIVMNDLPEGI
HHHHHCEEEEEEECCCCCCCEEEEECCEEEEECCCEEECCCCCCHHHHCCHHHHCCCCCC
RTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETPLAQKRVEPIVPESTEQGWYIDK
EEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEC
SRIDFHLDPVLNQSVGGPENFYMYQLGVMGTADLWVTDHLLTTGSVFANIANNYDKFNYT
CCCEEEECCHHHCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCC
NPPKDSHLPRVRTHVREYVQNDVYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEV
CCCCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHCCCEEEEHHHHHHHHHHCCCCCEE
LYRPVDSNWAFGLDANYVKQRDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV
EEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCHHHHHHHHHHHH
GQYLAGDKGGTLEIAKRFDSGVVVGGYATITDASPDEYGEGDFTKGVYVSVPLDLFSSGP
CHHHCCCCCCEEHHHHHCCCCEEECCEEEEECCCCCCCCCCCCCCCEEEEECHHHHCCCC
TRSRAAIGWTPLTRDGGQQLGRKFGLYDMTSDRSVNFR
CCCCEEECCCCCCCCHHHHHHHHCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]