| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is psiE [H]
Identifier: 29144394
GI number: 29144394
Start: 4275943
End: 4276353
Strand: Direct
Name: psiE [H]
Synonym: t4132
Alternate gene names: 29144394
Gene position: 4275943-4276353 (Clockwise)
Preceding gene: 29144393
Following gene: 29144398
Centisome position: 89.23
GC content: 46.47
Gene sequence:
>411_bases ATGATGCCATTATCGCGCTCACGTCTTGAGTTTATCGCCACGATTTTACAAAACGTACTAAATTTGGGGCTGCTTACCCT CGGTCTGATCCTGGTCGTTTTTCTCGGTAAAGAGACGGTGCATCTGGCGGACGCATTATTCGCGCCTGAGCAAGCCAGCA AATATGAACTGGTGGAAGGGCTGGTGATCTACTTTCTTTATTTCGAATTTATTGCGCTGATTGTGAAGTACTTTAAGTCT GGCCTTCACTTTCCGCTGCGCTATTTCGTGTACATTGGGATCACGGCGATTGTGCGTCTGATCATTGTCGATCATAAAAC GCCAATGGATGTATTACTCTATTCGGCGGCGATCCTCCTGTTGGTTATCACGTTGTGGTTATGTAATTCGAACCGACTAC GGCGAGAATAG
Upstream 100 bases:
>100_bases TACCTTATTGAACAAAATATAAACACAAATAAAAAATATAGATGCCCGTCACATTTGTGCGTTATACAGAAACCTCGCCG CAGAGAAAGAGGGGGCTGTT
Downstream 100 bases:
>100_bases GCGTCGCCACACCGTAACGGACGTATGGCGTGGCAATAAATTAGCCGCTGTCTATAACGCATAAAAAAAGCGCTCCGAAG AGCGCCAAAATACGACCATA
Product: phosphate-starvation-inducible protein PsiE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MMPLSRSRLEFIATILQNVLNLGLLTLGLILVVFLGKETVHLADALFAPEQASKYELVEGLVIYFLYFEFIALIVKYFKS GLHFPLRYFVYIGITAIVRLIIVDHKTPMDVLLYSAAILLLVITLWLCNSNRLRRE
Sequences:
>Translated_136_residues MMPLSRSRLEFIATILQNVLNLGLLTLGLILVVFLGKETVHLADALFAPEQASKYELVEGLVIYFLYFEFIALIVKYFKS GLHFPLRYFVYIGITAIVRLIIVDHKTPMDVLLYSAAILLLVITLWLCNSNRLRRE >Mature_136_residues MMPLSRSRLEFIATILQNVLNLGLLTLGLILVVFLGKETVHLADALFAPEQASKYELVEGLVIYFLYFEFIALIVKYFKS GLHFPLRYFVYIGITAIVRLIIVDHKTPMDVLLYSAAILLLVITLWLCNSNRLRRE
Specific function: Unknown
COG id: COG3223
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psiE family [H]
Homologues:
Organism=Escherichia coli, GI1790462, Length=136, Percent_Identity=87.5, Blast_Score=214, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009315 - InterPro: IPR020948 [H]
Pfam domain/function: PF06146 PsiE [H]
EC number: NA
Molecular weight: Translated: 15604; Mature: 15604
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPLSRSRLEFIATILQNVLNLGLLTLGLILVVFLGKETVHLADALFAPEQASKYELVEG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH LVIYFLYFEFIALIVKYFKSGLHFPLRYFVYIGITAIVRLIIVDHKTPMDVLLYSAAILL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LVITLWLCNSNRLRRE HHHHHHHHCCCCCCCC >Mature Secondary Structure MMPLSRSRLEFIATILQNVLNLGLLTLGLILVVFLGKETVHLADALFAPEQASKYELVEG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH LVIYFLYFEFIALIVKYFKSGLHFPLRYFVYIGITAIVRLIIVDHKTPMDVLLYSAAILL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LVITLWLCNSNRLRRE HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA