Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29144185
Identifier: 29144185
GI number: 29144185
Start: 4049239
End: 4050828
Strand: Direct
Name: 29144185
Synonym: t3913
Alternate gene names: NA
Gene position: 4049239-4050828 (Clockwise)
Preceding gene: 29144183
Following gene: 29144187
Centisome position: 84.5
GC content: 56.42
Gene sequence:
>1590_bases ATGACGAATAGCGCTTCGCAGGCGACACGCGCGCCTTTTGAACATAGCCTGGGGATTATCCGCCAGGCATCAATAGAAAT CCTGCTGCTGCTGGGTATTCATACCACAGAGGGAAAAGAGCCCCGGTGGTTCATGGAACAACTTGAGCAGGCGCGTCTTA ACCTGGGCGGTTGGGGCGCGGTGGCGAAAAAATTGCGGATAAATGACGCGCAGTTGAGCCAGTTTATGCTGCAACTGCGT CATCTTCAGCAGCATGTTCCCCAGTATGACAGCGGGCAAGAGGTGAGCGAAAATCAACTCCTTGCCGCGTTGCGTTTTGT CACCTCGCTGGAACATCTACGTCAGCAGCAGCCGCTACTGACGTATCAAACTGAGCTGGAAGACCCCGACCAGGAGGCGC ATCTTGAGGCGCAGCGTCAGCTTCGGGCGATAGAACTGACGTTAAAAGCGCTTATTGCGCGCGCATGGCCGGATCGGGCG TCCCTGAATCACTACCTCAAGCAACATTTTGGCCCGGACCGTTTGCGCCAGTGGTTAAAACAGGGAGAAGATCAACATGC GCTGGAGGGCATGTTGTTTAGCGAACTGGCGCTTATGGTGGTCGATAAAAAATTGTTTGCTCGTCATTACGTCAGAATTT TTAATGACGCCTCAGCGTTAACGCTGTTCGCCGAGTCGCGCACCACTCTGCGTATGTTTCTGGATGATTGCCGCCTCGCG CGAAACGAGGTTATCGCCAGGCAGCCGCTCACCTCAGCGCAGCTTATGCTGCTAAACGTTCAGTATCAGCAAATCGTTCG GCCCATCCAGCGCGCCTATGCCGAAAAACGTACCCGCGTGAATCCCGCTTCGTTTCTGCTGGCGGATGAACGTGAATTGC GCCAGTTCTGGGAAACCGCGCGGCTTAAAGATCGGCAGGCCGGGGGAGATAAGCATGAGATTAGCGAGAGCATAGAACCA CCGCGTAAGCGGCCTCCGCGTACGCCTGAAGAGCGTGAGCAACTTATTTCCGGCGCTTTGTGGGGCGGGGTTGGCGTCAT GACGCTGGCGATACTGGCGGGCGCGTTCTGGCTATTTAGTTCGTCATCGCCAAGCTCCGATAACGGGCAAGCTCCCGCAA TGGCGCAGGATGAACCGCCGCGCGAGGCGCCTTCCGCGCGGGAAACGCTCAATCATATGGGGATTACCTGGGATGCGTTT ACCATGCGGGCGGCGATAGAGCGCAATGATACGCGGGTGACGGCGCTGTTCCTCCAGGGCGGAATGAACTGGCAGCTCGC GTGGACGGAGCAGGCGTTTGCGGCAGGACATACCGAGGTGCTGCAACTGTTGTTGCGTTATCCCGCGCTGATGGATGAGG TCAAACCCTGCCGACGATTTATCACAACGTTAAGTCATGACATGTCGAGCGGCGCGCCGCTGACCGCGATGCATAAAACC TATTTGCAAACGTTTTGCACCGTTCCGGCTGTTGTGACGCGCCAGCAGTACGATACGGAGCAGGCCCAGCTGCGCGCTCA GGCCCGGCCCAGCGCAGACAATAAAAAATGGCTGAAAATTCAGTCAGCCATTTATGATGCGATTCACTGA
Upstream 100 bases:
>100_bases TTAAGTCACTGAAATGTGGCTAAATCTGTTATATCTATGAAAAAACATAATTAAAAGAAAACGAAGATCTCGTCGCGGGA TCGTCTTTTTAGGGAAGATA
Downstream 100 bases:
>100_bases GCCCGGAGCAGGTTAAGGCTCTCCGTAAAGGCCAATCAGGCGGCGCACCACGCCATTGGTCCAGCCGAACCCATCCTGTA GCGGATACTCGCCCCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLR HLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLLTYQTELEDPDQEAHLEAQRQLRAIELTLKALIARAWPDRA SLNHYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETARLKDRQAGGDKHEISESIEP PRKRPPRTPEEREQLISGALWGGVGVMTLAILAGAFWLFSSSSPSSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAF TMRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT YLQTFCTVPAVVTRQQYDTEQAQLRAQARPSADNKKWLKIQSAIYDAIH
Sequences:
>Translated_529_residues MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLR HLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLLTYQTELEDPDQEAHLEAQRQLRAIELTLKALIARAWPDRA SLNHYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETARLKDRQAGGDKHEISESIEP PRKRPPRTPEEREQLISGALWGGVGVMTLAILAGAFWLFSSSSPSSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAF TMRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT YLQTFCTVPAVVTRQQYDTEQAQLRAQARPSADNKKWLKIQSAIYDAIH >Mature_528_residues TNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLRH LQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLLTYQTELEDPDQEAHLEAQRQLRAIELTLKALIARAWPDRAS LNHYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLAR NEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETARLKDRQAGGDKHEISESIEPP RKRPPRTPEEREQLISGALWGGVGVMTLAILAGAFWLFSSSSPSSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAFT MRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKTY LQTFCTVPAVVTRQQYDTEQAQLRAQARPSADNKKWLKIQSAIYDAIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60354; Mature: 60222
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGA CCCCCCHHHCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHH VAKKLRINDAQLSQFMLQLRHLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLL HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE TYQTELEDPDQEAHLEAQRQLRAIELTLKALIARAWPDRASLNHYLKQHFGPDRLRQWLK EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH QGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETA HHHHHHCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH RLKDRQAGGDKHEISESIEPPRKRPPRTPEEREQLISGALWGGVGVMTLAILAGAFWLFS HHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSSPSSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAFTMRAAIERNDTRVTALFLQG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHHHHHHHCCCCEEEEEEEEC GMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT CCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YLQTFCTVPAVVTRQQYDTEQAQLRAQARPSADNKKWLKIQSAIYDAIH HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGA CCCCCHHHCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHH VAKKLRINDAQLSQFMLQLRHLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLL HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE TYQTELEDPDQEAHLEAQRQLRAIELTLKALIARAWPDRASLNHYLKQHFGPDRLRQWLK EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH QGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETA HHHHHHCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH RLKDRQAGGDKHEISESIEPPRKRPPRTPEEREQLISGALWGGVGVMTLAILAGAFWLFS HHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSSPSSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAFTMRAAIERNDTRVTALFLQG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHHHHHHHCCCCEEEEEEEEC GMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT CCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH YLQTFCTVPAVVTRQQYDTEQAQLRAQARPSADNKKWLKIQSAIYDAIH HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA