Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yhjG [H]
Identifier: 29144179
GI number: 29144179
Start: 4041590
End: 4043650
Strand: Direct
Name: yhjG [H]
Synonym: t3907
Alternate gene names: 29144179
Gene position: 4041590-4043650 (Clockwise)
Preceding gene: 29144178
Following gene: 29144183
Centisome position: 84.34
GC content: 54.63
Gene sequence:
>2061_bases ATGACTAAAGCAGGCAAAATAACCGCCGCCATCACAGGGACTTTCTTGTTGTTGATCGCCATAGTGATTTTGTTGATCGC AACATTTGACTGGAACCGCCTCAAACCGACCATCAACCAGAAAGTCTCTACCGAATTGAACCGGCCTTTCGCTATTCGCG GCGATTTAGGCGTGGTGTGGGAACGCCAAAAACAGGAGTCCGGCTGGCGAAGCTGGGTACCGTGGCCGCATGTTCACGCG GAAGACGTCATTCTCGGCAATCCGCCGGATATTCCGGAAGTCACGATGGTGCATCTGCCACGCGTTGAGGCGACGCTTGC CCCGCTGGCGCTCCTGACCAAAACCGTCTGGCTGCCGTGGATCAAACTGGTGAAACCCGACGCGCGTCTTATTCGTCTGT CCGAGAAAACCAATAACTGGACCTTTAACCTCGCGCAAGACAAGAATACGGACCCCAATGCTAAACCTTCCGCCTGGTCC TTCCGGCTGGATAATATTCTCTTCGACCAGGGGCGAATCGCGATCGATGATAAGGTCAGTAAAGCGGATATCACTATTCT GGTCGATCCGTTAGGCAAACCGTTGCCGTTCAGCGAAGTGACGGGAACGAAAGGCAAAGCAGACAAATCCACCGTGGGCG ACTATGTCTTCGGCCTGAAGGCGCAGGGGCGTTATAACGGGGAACCGTTGACCGGTACGGGCAAAATAGGCGGTATGCTG GCGCTACGTAGCGAAAGTACGCCTTTTCCTGTGCAGGCCGATTTCCGCTCTGGCAATACGCGGGTGGCTTTTAGCGGCGT GGTGAACGAGCCGATGAAAATGGGCGGCGTCGATCTGCGGCTTAAATTCTCTGGCGATTCACTGGGCGATTTATATGATT TAACCGGCGTGCTGCTGCCGGATACGCCGCCGTTTGAGACCGATGGGCGATTGGTAGCGAAAATTGACGCCGAAAAGTCA TCGGTATTTAATTATCGCGGTTTTAACGGGCGCATTGGCGACAGTGATATCCACGGCACCTTCACTTATACCACCGGTAA ACCGAGCCCCAAACTGGAAGGCGATGTCGAATCGCGCCAGTTACGCCTGGCCGATCTTGGGCCGCTGATTGGCGTGGATT CCGGGAAAGACGCTGAGCAGTCGAAACGGTCTGAACAGCGCAAAGGCGAGAAGAATGTTCAGCCGGCGGATAAAGTGTTG CCTTACGATCGCTTTGAAACCGACAAATGGGACGTCATGGACGCCGATGTCCGGTTTAAAGGCCGGCGTATTGAGCATGG CGGCAGTCTACCGATTAGCGATCTTTCGACCCATATCATCCTGAAAAACGCCGACTTACGTCTACAGCCGCTGAAGTTTG GTCTGGCAGGCGGCAGTATTGTCTCCAACATCCATCTGGAAGGGGATAAAAAGCCGATGCAGGGGCGGGCGGATATACAG GCGCGTCGGCTGAAGCTTAAAGAACTGATGCCGGATGTGGAGCTGATGCAGAAAACGCTGGGCGAGCTGAACGGCGATGC GGATATTCGCGGCACGGGCAATTCGGTCGCCGCGCTGCTTGGCAACAGTAACGGCAATCTCAAATTATTGATGAATGATG GATTGATTAGCCGCAACCTGATGGAAATCGTGGGGCTGAACGTCGGCAACTATATTATCGGGCAGATTTTTGGCGATGAC GAAGTGCGGGTTAACTGCGCGGCGGCGAATCTCAATATTGCGAACGGCGTGGCGCGACCGCAAATTTTTGCTTTTGATAC AGAAAATGCGTTGATTAACGTGACCGGTACGGCGAGCTTCGCCTCTGAACAGCTCGATTTAACCATTGATCCGGAAAGTA AGGGGATTCGTATTATTACGCTGCGATCGCCGCTTTACGTGCGCGGGACATTTAAAAATCCGCAGGCGGGCGTCAAGCCC GGCCCGCTGATTGCGCGCGGCGCGGTTGCGGCAGCGCTGGCGACGTTGGTAACGCCCGCCGCCGCGCTATTAGCGCTCAT TTCGCCCTCTGAGGGCGAAGCCAATCAGTGCCGGACGATTTTAACGCAGATGAAGCAGTAA
Upstream 100 bases:
>100_bases GTTCCCGTAATACGTGGTATTACGAGGTGCGGTCATCCTCCTTTTTCGTCTGGCTGAACTATCTTTAGGACAGGCAAGGG AAGAAGTGAGGAAATAACAC
Downstream 100 bases:
>100_bases CGTGAAACGTCGCGCCGGATGACGCCATCCGGCGCCCTATTACAACGCCTGATGACGCGTCTCATGGGTTAACAGCAGTG CAATCAGCGTCAGCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 685
Protein sequence:
>686_residues MTKAGKITAAITGTFLLLIAIVILLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHA EDVILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQDKNTDPNAKPSAWS FRLDNILFDQGRIAIDDKVSKADITILVDPLGKPLPFSEVTGTKGKADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGML ALRSESTPFPVQADFRSGNTRVAFSGVVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKS SVFNYRGFNGRIGDSDIHGTFTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSGKDAEQSKRSEQRKGEKNVQPADKVL PYDRFETDKWDVMDADVRFKGRRIEHGGSLPISDLSTHIILKNADLRLQPLKFGLAGGSIVSNIHLEGDKKPMQGRADIQ ARRLKLKELMPDVELMQKTLGELNGDADIRGTGNSVAALLGNSNGNLKLLMNDGLISRNLMEIVGLNVGNYIIGQIFGDD EVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKP GPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILTQMKQ
Sequences:
>Translated_686_residues MTKAGKITAAITGTFLLLIAIVILLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHA EDVILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQDKNTDPNAKPSAWS FRLDNILFDQGRIAIDDKVSKADITILVDPLGKPLPFSEVTGTKGKADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGML ALRSESTPFPVQADFRSGNTRVAFSGVVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKS SVFNYRGFNGRIGDSDIHGTFTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSGKDAEQSKRSEQRKGEKNVQPADKVL PYDRFETDKWDVMDADVRFKGRRIEHGGSLPISDLSTHIILKNADLRLQPLKFGLAGGSIVSNIHLEGDKKPMQGRADIQ ARRLKLKELMPDVELMQKTLGELNGDADIRGTGNSVAALLGNSNGNLKLLMNDGLISRNLMEIVGLNVGNYIIGQIFGDD EVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKP GPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILTQMKQ >Mature_685_residues TKAGKITAAITGTFLLLIAIVILLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVWERQKQESGWRSWVPWPHVHAE DVILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLVKPDARLIRLSEKTNNWTFNLAQDKNTDPNAKPSAWSF RLDNILFDQGRIAIDDKVSKADITILVDPLGKPLPFSEVTGTKGKADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGMLA LRSESTPFPVQADFRSGNTRVAFSGVVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLPDTPPFETDGRLVAKIDAEKSS VFNYRGFNGRIGDSDIHGTFTYTTGKPSPKLEGDVESRQLRLADLGPLIGVDSGKDAEQSKRSEQRKGEKNVQPADKVLP YDRFETDKWDVMDADVRFKGRRIEHGGSLPISDLSTHIILKNADLRLQPLKFGLAGGSIVSNIHLEGDKKPMQGRADIQA RRLKLKELMPDVELMQKTLGELNGDADIRGTGNSVAALLGNSNGNLKLLMNDGLISRNLMEIVGLNVGNYIIGQIFGDDE VRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKPG PLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILTQMKQ
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=686, Percent_Identity=92.4198250728863, Blast_Score=1273, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 74655; Mature: 74523
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAGKITAAITGTFLLLIAIVILLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVW CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCCEEE ERQKQESGWRSWVPWPHVHAEDVILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPW ECCHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH IKLVKPDARLIRLSEKTNNWTFNLAQDKNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVS HHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCEEECCCCEEECCCCC KADITILVDPLGKPLPFSEVTGTKGKADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGML CCEEEEEECCCCCCCCCHHCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCEE ALRSESTPFPVQADFRSGNTRVAFSGVVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLP EECCCCCCCCEEEECCCCCEEEEEECCCCCCHHHCCEEEEEEECCCCCCCHHHHCEEECC DTPPFETDGRLVAKIDAEKSSVFNYRGFNGRIGDSDIHGTFTYTTGKPSPKLEGDVESRQ CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHE LRLADLGPLIGVDSGKDAEQSKRSEQRKGEKNVQPADKVLPYDRFETDKWDVMDADVRFK EEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEEECCEEEC GRRIEHGGSLPISDLSTHIILKNADLRLQPLKFGLAGGSIVSNIHLEGDKKPMQGRADIQ CEEECCCCCCCHHHCCEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHH ARRLKLKELMPDVELMQKTLGELNGDADIRGTGNSVAALLGNSNGNLKLLMNDGLISRNL HHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCHHHH MEIVGLNVGNYIIGQIFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASF HHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCC ASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKPGPLIARGAVAAALATLVTPA CCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHH AALLALISPSEGEANQCRTILTQMKQ HHHHEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TKAGKITAAITGTFLLLIAIVILLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVVW CCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCCEEE ERQKQESGWRSWVPWPHVHAEDVILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPW ECCHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH IKLVKPDARLIRLSEKTNNWTFNLAQDKNTDPNAKPSAWSFRLDNILFDQGRIAIDDKVS HHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCEEECCCCEEECCCCC KADITILVDPLGKPLPFSEVTGTKGKADKSTVGDYVFGLKAQGRYNGEPLTGTGKIGGML CCEEEEEECCCCCCCCCHHCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCEE ALRSESTPFPVQADFRSGNTRVAFSGVVNEPMKMGGVDLRLKFSGDSLGDLYDLTGVLLP EECCCCCCCCEEEECCCCCEEEEEECCCCCCHHHCCEEEEEEECCCCCCCHHHHCEEECC DTPPFETDGRLVAKIDAEKSSVFNYRGFNGRIGDSDIHGTFTYTTGKPSPKLEGDVESRQ CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHE LRLADLGPLIGVDSGKDAEQSKRSEQRKGEKNVQPADKVLPYDRFETDKWDVMDADVRFK EEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEEECCEEEC GRRIEHGGSLPISDLSTHIILKNADLRLQPLKFGLAGGSIVSNIHLEGDKKPMQGRADIQ CEEECCCCCCCHHHCCEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHH ARRLKLKELMPDVELMQKTLGELNGDADIRGTGNSVAALLGNSNGNLKLLMNDGLISRNL HHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCHHHH MEIVGLNVGNYIIGQIFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASF HHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCC ASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKPGPLIARGAVAAALATLVTPA CCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHH AALLALISPSEGEANQCRTILTQMKQ HHHHEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]