| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yhjN
Identifier: 29144172
GI number: 29144172
Start: 4027231
End: 4029531
Strand: Direct
Name: yhjN
Synonym: t3899
Alternate gene names: 29144172
Gene position: 4027231-4029531 (Clockwise)
Preceding gene: 29144171
Following gene: 29144173
Centisome position: 84.04
GC content: 56.93
Gene sequence:
>2301_bases ATGAAAAGAAAATTGTCCTGGATGTGTGCGGCGGTAATAGGATTAAGCGCGTTTCCTGCTTTCATGACGGCGGCGGCGCC TGCGATGCCGCCATTGATCAATGCTGAACCCACCGAGCCTGCGCAGTCGCCCGTAACTGAGGCGCCCGTCGTGGCGCAGA CCGCGCCTTCGCGCGAGGTCAAGCTGACCTTTGCGCAAATCGCGCCGCCGCCGGGCAGTATGGCGCTGCGTGGCGTTAAC CCTAACGGCGGCATTGAATTTGGTATGCGCAGCGATGAAGTGGCGTCGAAAGCGGTGTTGAATCTGGAATATACGCCCTC GCCGTCGCTCCTGCCGGTTCAGTCGCAGCTCAAGGTTTATCTCAATGATGAACTGATGGGCGTACTGCCGGTGACAAAAG AGCAGTTGGGGAAAAAGACGCTGGCGCAGGTACCTATCAATCCGCTATTTATCACCGACTTTAACCGGGTGCGGCTGGAG TTTGTCGGCCACTATCGCGACGTGTGTGAAAACCCGGCCAGCAGTACTCTGTGGTTAGACATCGGGCGAAATAGCGCCCT GGATCTGACCTATAACATGCTGGCGGTGAATAACGATCTGTCCCACTTCCCGGTGCCGTTTTTCGATCCGCGGGATAACC GTCCGGTGACGTTGCCGATAGTGTTTGCTGACATGCCGGATCTGGCGCAGCAGCAGGCGGCTTCTATTGTCGCGTCCTGG TTTGGCTCGCGGGCGGGCTGGCGCGGTCAGCGCTTCCCGGTGTTGTATAATCACCTGCCGGATCGCAATGCGATCGTGTT CGCCACCAACGATCGACGCCCCGATTTCCTGCGCGATCATCCTGCGGTTAACGCGCCGGTTATCGAGATGATGAACCATC CGGATAATCCGTATGTGAAGTTGCTGGTCGTGTTTGGTCGAGATGATAAAGACCTGTTGCAGGCGGCAAAAGGTATCGCG CAAGGGAATATTCTCTTCCGTGGTTCCAGCGTGGTGGTCAACGATGTAAAACCGCTGCTGGCGCGCAAACCGTATGATGC GCCGAACTGGGTGCGTACCGATCGCCCGGTCACTTTTGGCGAGCTGAAAACCTATGAAGAGCAGCTCCAGTCGAGTGGGC TGGAGCCGGCGCCCATCAACGTTTCTTTGAATCTGCCGCCGGACCTCTATTTGCTGCGTAGCAACGGTATTGATATGGAT CTCAACTATCGTTATACCTCGCCGCCGACCAAAGACAGTTCGCGGCTGGATATCAGTCTGAATAACCAGTTCTTGCAAGC CTTTAGCCTTAACAGCACGCAGGAAACTAATCGACTCCTGTTGCGCCTGCCGGTACTTCAGGGACTGCTGGATGGTAAAA CGGATGTGTCTATTCCGGCGCTCAAACTGGGGGCGATGAACCAACTACGTTTTGATTTCCGCTACATGAATCCGATGCCG GGCGGGTCGGTGGACAACTGTATTACTTTCCAGCCAGTACCGAATCATGTGGTGATAGGGGATGACTCCACTATCGATTT TTCGAAATATTACCACTTTATCGCGATGCCGGATTTACGCGCGTTCGCCAATGCGGGTTTCCCGTTCAGCCGGATGGCCG ACCTGTCTGACACGCTGGCGGTGATGCCGAAGACCCCAACCGAAGCGCAAATGGAAACGCTGCTGAATACGGTCGGCGCC ATTGGCGGGCAGACCGGTTTCCCGGCAATTAATCTGACAATCACCGATGATAGCGCTCAGATAGCCGACAAAGACGCCGA TCTGCTGATTATTGGCGCTATTCCGGGCAAGCTAAAAGACGATAAGCGTATCGATCTGTTGGTGCAGGCGACACAAAGCT GGGTAAAAACCCCGATGCGGCAGACCGCTTTCCCGTCGATTATGCCGGATGAGGCCGATCGCGCGGCGGATGCGCAGTCC ACCGTCACCGCCAGCGGCCCGATGGCGGCGGTGGTGGGCTTCCAGTCGCCGTTTAATGATCAGCGCAGCGTGATTGCTCT GCTGGCTGACAGCCCGCGCGGTTACCAGCTACTGAACGACGCCGTGAACGACAGCGGTAAACGCGCCGCGATGTTTGGTT CCGTGGCGGTGATCCGCGAGTCCGGCGTTCACAGTCTGCGCGTTGGCGATATCTATTACGTCGGACATCTGCCGTGGTTT GAGCGGCTGTGGTATGCGCTGGCGAATCACCCGGTGCTGCTGGCGGTACTGGCGGCCCTCAGTGTGGTATTACTGGCGTG GGTATTGTGGCGTCTGCTACGTATTCTCAGTCGCCGTCGTCTCGACCCTGACCATGAGTAA
Upstream 100 bases:
>100_bases GCCTGGATTGTATCGTTTATTCCGCGTCGCCCGGAGCGGCAAGCGGCGATACAGCCGTCGGATCGGGTTATGGCTCAGGC TCAACAATGATGATAATGCG
Downstream 100 bases:
>100_bases CGCATGATGACTATGCTGCGCGGATGGATAACGATGATCGTCATGCTGACGGCAATAAATGCGCAGGCAGCGTGTAGCTG GCCTGCGTGGGAACAGTTCA
Product: cellulose synthase regulator protein
Products: NA
Alternate protein names: Cellulose synthase regulatory subunit
Number of amino acids: Translated: 766; Mature: 766
Protein sequence:
>766_residues MKRKLSWMCAAVIGLSAFPAFMTAAAPAMPPLINAEPTEPAQSPVTEAPVVAQTAPSREVKLTFAQIAPPPGSMALRGVN PNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLE FVGHYRDVCENPASSTLWLDIGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASW FGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMNHPDNPYVKLLVVFGRDDKDLLQAAKGIA QGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMD LNYRYTSPPTKDSSRLDISLNNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMNPMP GGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSDTLAVMPKTPTEAQMETLLNTVGA IGGQTGFPAINLTITDDSAQIADKDADLLIIGAIPGKLKDDKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRAADAQS TVTASGPMAAVVGFQSPFNDQRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWF ERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRLDPDHE
Sequences:
>Translated_766_residues MKRKLSWMCAAVIGLSAFPAFMTAAAPAMPPLINAEPTEPAQSPVTEAPVVAQTAPSREVKLTFAQIAPPPGSMALRGVN PNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLE FVGHYRDVCENPASSTLWLDIGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASW FGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMNHPDNPYVKLLVVFGRDDKDLLQAAKGIA QGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMD LNYRYTSPPTKDSSRLDISLNNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMNPMP GGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSDTLAVMPKTPTEAQMETLLNTVGA IGGQTGFPAINLTITDDSAQIADKDADLLIIGAIPGKLKDDKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRAADAQS TVTASGPMAAVVGFQSPFNDQRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWF ERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRLDPDHE >Mature_766_residues MKRKLSWMCAAVIGLSAFPAFMTAAAPAMPPLINAEPTEPAQSPVTEAPVVAQTAPSREVKLTFAQIAPPPGSMALRGVN PNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLE FVGHYRDVCENPASSTLWLDIGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASW FGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMNHPDNPYVKLLVVFGRDDKDLLQAAKGIA QGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMD LNYRYTSPPTKDSSRLDISLNNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMNPMP GGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSDTLAVMPKTPTEAQMETLLNTVGA IGGQTGFPAINLTITDDSAQIADKDADLLIIGAIPGKLKDDKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRAADAQS TVTASGPMAAVVGFQSPFNDQRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWF ERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRLDPDHE
Specific function: Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP)
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AcsB/BcsB family
Homologues:
Organism=Escherichia coli, GI1789952, Length=779, Percent_Identity=82.6700898587933, Blast_Score=1319, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): BCSB_SALTI (Q8Z290)
Other databases:
- EMBL: AL627281 - EMBL: AE014613 - RefSeq: NP_458302.1 - RefSeq: NP_807514.1 - GeneID: 1071202 - GeneID: 1250406 - GenomeReviews: AE014613_GR - GenomeReviews: AL513382_GR - KEGG: stt:t3899 - KEGG: sty:STY4182 - HOGENOM: HBG367709 - OMA: QPYDAPN - ProtClustDB: PRK11114 - BioCyc: SENT209261:T3899-MONOMER - BioCyc: SENT220341:STY4182-MONOMER - InterPro: IPR003920 - InterPro: IPR018513 - PRINTS: PR01440
Pfam domain/function: PF03170 BcsB
EC number: NA
Molecular weight: Translated: 84386; Mature: 84386
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1244c1a8)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKLSWMCAAVIGLSAFPAFMTAAAPAMPPLINAEPTEPAQSPVTEAPVVAQTAPSREV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEE KLTFAQIAPPPGSMALRGVNPNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVY EEEEEEECCCCCCEEEEECCCCCCEEECCCCHHHHCEEEEEEEECCCCCEEECCCCEEEE LNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLEFVGHYRDVCENPASSTLWLD ECCCEEEEECCCHHHHCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEE IGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASW ECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH FGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMNHPDNPYVK HCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHCCCCCCCCHHHHHCCCCCCEEE LLVVFGRDDKDLLQAAKGIAQGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFG EEEEECCCCHHHHHHHHCCCCCCEEEECCCEEEECHHHHHHCCCCCCCCCCCCCCCCCHH ELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMDLNYRYTSPPTKDSSRLDISL HHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCCCEEEEEE NNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMNPMP CCCEEHHCCCCCCCCHHHEEEEEHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEECCCC GGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSDTLA CCCCCCEEEECCCCCEEEECCCCCEEHHHHEEEEECCCHHHHHCCCCCHHHHHCCCCCEE VMPKTPTEAQMETLLNTVGAIGGQTGFPAINLTITDDSAQIADKDADLLIIGAIPGKLKD ECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHCCCCCCEEEEECCCCCCCC DKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRAADAQSTVTASGPMAAVVGFQSPFND CCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHCCCCCEEECCCCEEEEEECCCCCCC QRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWF CCEEEEEEECCCCCHHHHHHHHCCCCCEEEHHCCEEEEECCCCCEEEECCEEEECCCCHH ERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRLDPDHE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH >Mature Secondary Structure MKRKLSWMCAAVIGLSAFPAFMTAAAPAMPPLINAEPTEPAQSPVTEAPVVAQTAPSREV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEE KLTFAQIAPPPGSMALRGVNPNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVY EEEEEEECCCCCCEEEEECCCCCCEEECCCCHHHHCEEEEEEEECCCCCEEECCCCEEEE LNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLEFVGHYRDVCENPASSTLWLD ECCCEEEEECCCHHHHCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEE IGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASW ECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH FGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMNHPDNPYVK HCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHCCCCCCCCHHHHHCCCCCCEEE LLVVFGRDDKDLLQAAKGIAQGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFG EEEEECCCCHHHHHHHHCCCCCCEEEECCCEEEECHHHHHHCCCCCCCCCCCCCCCCCHH ELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMDLNYRYTSPPTKDSSRLDISL HHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCCCEEEEEE NNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMNPMP CCCEEHHCCCCCCCCHHHEEEEEHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEECCCC GGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSDTLA CCCCCCEEEECCCCCEEEECCCCCEEHHHHEEEEECCCHHHHHCCCCCHHHHHCCCCCEE VMPKTPTEAQMETLLNTVGAIGGQTGFPAINLTITDDSAQIADKDADLLIIGAIPGKLKD ECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHCCCCCCEEEEECCCCCCCC DKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRAADAQSTVTASGPMAAVVGFQSPFND CCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHCCCCCEEECCCCEEEEEECCCCCCC QRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWF CCEEEEEEECCCCCHHHHHHHHCCCCCEEEHHCCEEEEECCCCCEEEECCEEEECCCCHH ERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRLDPDHE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504