Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is waaJ [H]
Identifier: 29144082
GI number: 29144082
Start: 3921140
End: 3922150
Strand: Direct
Name: waaJ [H]
Synonym: t3802
Alternate gene names: 29144082
Gene position: 3921140-3922150 (Clockwise)
Preceding gene: 29144081
Following gene: 29144083
Centisome position: 81.83
GC content: 34.72
Gene sequence:
>1011_bases ATGGATTCATTTCCTGAGATAGAGATAGCTGAATATAAAGTTTTTGATGAAAGTAATAATAATGATGATAACGTATTAAA CATTTCTTATGGCGTCGATGAAAACTATCTTGATGGTGTGGGGGTATCAATCGCTTCCGTTGTATTAAACAATAATATCC CGCTTGCTTTTCATATTATTTGTGACTCATACTCCCCGTGTTTTGTAAAATATATAGAGCGTTTAGCCGTACAGCATCAC ATTAAAATTTCTCTTTATCTTATTAAAGTAGAAAGCCTTGAAGTATTGCCCCAAACTAAAGTATGGTCGAGAGCAATGTA TTTTCGTTTATTTGCTTTCGATTATCTCAGCAAGAAGGTAAACACCTTACTTTATTTGGATGCCGATGTTGTATGTAAAG GATCTTTGCAAGATCTTCTACAGCTTGATCTGACAGAGAAGATTGCTGCGGTAGTAAAAGATGTTGATTCCATCCAGAAT AAGGTAAATGAGAGATTAAGCGCTTTTAATTTACAAGGTGGTTATTTTAACTCCGGCGTGGTTTTTGTTAACCTGAAATT ATGGAAAGAGAATGCCTTAACTGAAAAGGCATTTTTACTTCTGGCAGGTAAAGAAGCTGACTCTTTTAAATATCCCGATC AGGATGTTTTGAATATTCTCCTACAGGATAAAGTTATTTTTCTACCTCGACCATATAATACCATTTATACTATCAAAAGT GAGTTGAAAGATAGGTCACATAAAAAATATAGCAATATAATTAATGATAATACTATTTTAATTCATTATACGGGCGCTAC AAAACCATGGCATGCCTGGGCAAATTATCCTTCAGTTATCTATTATAAAAATGCACGACTGAACTCGCCCTGGAAAGATT CTCCTGCAAAAGATGCGCGTACCATAGTTGAATTTAAGAAGCGATATAAACATCTTCTCGTGCAGGGGCATTATTTTAAA GGCCTTCTGGCTGGAAGCGCATATCTTTATCGTAAACTTTTCCACAAATAA
Upstream 100 bases:
>100_bases CAAAGCATATGTTTAATCAGAAGCATTATACTTCGGGTATAAATTATTATATAGCCTACTTTAAACGTAAACTTCTTGAA TAAAACCCATAGGTGATGTA
Downstream 100 bases:
>100_bases TTCCCTTCCCTAAATCTCCATTATGATTATTGAAAAAAAGGTTAAAAACTATACCGTCTTTGTCAAAAAAGACGGTGAAA AATATATTGAGATATTCAAA
Product: lipopolysaccharide 1,2-glucosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MDSFPEIEIAEYKVFDESNNNDDNVLNISYGVDENYLDGVGVSIASVVLNNNIPLAFHIICDSYSPCFVKYIERLAVQHH IKISLYLIKVESLEVLPQTKVWSRAMYFRLFAFDYLSKKVNTLLYLDADVVCKGSLQDLLQLDLTEKIAAVVKDVDSIQN KVNERLSAFNLQGGYFNSGVVFVNLKLWKENALTEKAFLLLAGKEADSFKYPDQDVLNILLQDKVIFLPRPYNTIYTIKS ELKDRSHKKYSNIINDNTILIHYTGATKPWHAWANYPSVIYYKNARLNSPWKDSPAKDARTIVEFKKRYKHLLVQGHYFK GLLAGSAYLYRKLFHK
Sequences:
>Translated_336_residues MDSFPEIEIAEYKVFDESNNNDDNVLNISYGVDENYLDGVGVSIASVVLNNNIPLAFHIICDSYSPCFVKYIERLAVQHH IKISLYLIKVESLEVLPQTKVWSRAMYFRLFAFDYLSKKVNTLLYLDADVVCKGSLQDLLQLDLTEKIAAVVKDVDSIQN KVNERLSAFNLQGGYFNSGVVFVNLKLWKENALTEKAFLLLAGKEADSFKYPDQDVLNILLQDKVIFLPRPYNTIYTIKS ELKDRSHKKYSNIINDNTILIHYTGATKPWHAWANYPSVIYYKNARLNSPWKDSPAKDARTIVEFKKRYKHLLVQGHYFK GLLAGSAYLYRKLFHK >Mature_336_residues MDSFPEIEIAEYKVFDESNNNDDNVLNISYGVDENYLDGVGVSIASVVLNNNIPLAFHIICDSYSPCFVKYIERLAVQHH IKISLYLIKVESLEVLPQTKVWSRAMYFRLFAFDYLSKKVNTLLYLDADVVCKGSLQDLLQLDLTEKIAAVVKDVDSIQN KVNERLSAFNLQGGYFNSGVVFVNLKLWKENALTEKAFLLLAGKEADSFKYPDQDVLNILLQDKVIFLPRPYNTIYTIKS ELKDRSHKKYSNIINDNTILIHYTGATKPWHAWANYPSVIYYKNARLNSPWKDSPAKDARTIVEFKKRYKHLLVQGHYFK GLLAGSAYLYRKLFHK
Specific function: Adds the glucose(II) group on the galactose(I) group of LPS [H]
COG id: COG1442
COG function: function code M; Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 8 family [H]
Homologues:
Organism=Escherichia coli, GI1790056, Length=339, Percent_Identity=58.4070796460177, Blast_Score=385, Evalue=1e-108, Organism=Escherichia coli, GI1790057, Length=326, Percent_Identity=35.5828220858896, Blast_Score=202, Evalue=4e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002495 - InterPro: IPR013645 [H]
Pfam domain/function: PF01501 Glyco_transf_8; PF08437 Glyco_transf_8N [H]
EC number: =2.4.1.58 [H]
Molecular weight: Translated: 38732; Mature: 38732
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSFPEIEIAEYKVFDESNNNDDNVLNISYGVDENYLDGVGVSIASVVLNNNIPLAFHII CCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHEECCCCCEEEEEE CDSYSPCFVKYIERLAVQHHIKISLYLIKVESLEVLPQTKVWSRAMYFRLFAFDYLSKKV ECCCCHHHHHHHHHHHHHHEEEEEEEEEEEECEECCCCHHHHHHHHHHHHHHHHHHHHHH NTLLYLDADVVCKGSLQDLLQLDLTEKIAAVVKDVDSIQNKVNERLSAFNLQGGYFNSGV CEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCE VFVNLKLWKENALTEKAFLLLAGKEADSFKYPDQDVLNILLQDKVIFLPRPYNTIYTIKS EEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEEEHH ELKDRSHKKYSNIINDNTILIHYTGATKPWHAWANYPSVIYYKNARLNSPWKDSPAKDAR HHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCHHHHH TIVEFKKRYKHLLVQGHYFKGLLAGSAYLYRKLFHK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDSFPEIEIAEYKVFDESNNNDDNVLNISYGVDENYLDGVGVSIASVVLNNNIPLAFHII CCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHEECCCCCEEEEEE CDSYSPCFVKYIERLAVQHHIKISLYLIKVESLEVLPQTKVWSRAMYFRLFAFDYLSKKV ECCCCHHHHHHHHHHHHHHEEEEEEEEEEEECEECCCCHHHHHHHHHHHHHHHHHHHHHH NTLLYLDADVVCKGSLQDLLQLDLTEKIAAVVKDVDSIQNKVNERLSAFNLQGGYFNSGV CEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCE VFVNLKLWKENALTEKAFLLLAGKEADSFKYPDQDVLNILLQDKVIFLPRPYNTIYTIKS EEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEEEHH ELKDRSHKKYSNIINDNTILIHYTGATKPWHAWANYPSVIYYKNARLNSPWKDSPAKDAR HHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCHHHHH TIVEFKKRYKHLLVQGHYFKGLLAGSAYLYRKLFHK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2235496; 9535865; 11677609 [H]