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The map label for this gene is stgB [H]

Identifier: 29143955

GI number: 29143955

Start: 3766760

End: 3767458

Strand: Direct

Name: stgB [H]

Synonym: t3660

Alternate gene names: 29143955

Gene position: 3766760-3767458 (Clockwise)

Preceding gene: 29143954

Following gene: 29143956

Centisome position: 78.61

GC content: 41.06

Gene sequence:

>699_bases
ATGAGTTTGTCTATGTTTGCTCGTGGAATAAAAATAGTTATTCTGGCACTCCTGTGCCTTAATCTTCCCTCTGCTTTTGC
AGGTATTGTGGTCGGTGGAACTCGCGTCATTTTTCATGGCAACGATCCTGACTCTACTATTTCTATTTACAATAAAGAAG
TTGATTTGCCTTATCTAATACAAGTATGGGTTGATCCTTTCAGTAAGGATGATAAGAGCAAACCACCTTTTACCGTCATT
CCGCCTGTTTCTCGTCTTGAGCCGAGTCAGGAAAAAGTGCTGCGCATTATTAAAACAGCGGGTGAGTTGCCAAAGGATCG
CGAATCTGTTTTTTGGTTTAATGTGAAAAACATTCCGCCATCCAGTAAAAATAAAGATAGCAGTACGCTTGAGATCGCAA
TTAAAACGCGTATCAAGTTATTCTGGCGCCCGGCCTCTATTACGCTTATCCCGGAAAAGGCGGTAGCTAAAGTCAAATGG
TATCGACAGGGAAGTAAACTGGTTGTAGAAAATAATAGTCCTATTCATATGAATATCATGGATGTCTCTGTAGACGGTAA
AGATGTTCCATTGAATATGATAAAGCCTTTTGAAAAATTAACGCTGGATTTACCTACTGGTGTTACGGGGCACGCTTTAG
CCTGGCGTTTTATTAATGATTACGGCGCGATTAGTAGCCCTGTTAAGCAAGCGCTTTAG

Upstream 100 bases:

>100_bases
TAAGATTCGCTCTTCTTAAACGTCTTTTATTAATTTATTGACGCCTGCCATTGTGAACAACTGTAGTTGTATAAATGCCC
GGCGTCTTTTTTATCCAGGG

Downstream 100 bases:

>100_bases
TTTTGCGATAAGGATATCTTGATGATTCACCCTCGTCTTTGCCTCGTCTTGATTTCAGGTGCTTATCTGAGTATCGCTTT
CCCGACAATGGCTAGGGAAA

Product: fimbrial chaperone protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSLSMFARGIKIVILALLCLNLPSAFAGIVVGGTRVIFHGNDPDSTISIYNKEVDLPYLIQVWVDPFSKDDKSKPPFTVI
PPVSRLEPSQEKVLRIIKTAGELPKDRESVFWFNVKNIPPSSKNKDSSTLEIAIKTRIKLFWRPASITLIPEKAVAKVKW
YRQGSKLVVENNSPIHMNIMDVSVDGKDVPLNMIKPFEKLTLDLPTGVTGHALAWRFINDYGAISSPVKQAL

Sequences:

>Translated_232_residues
MSLSMFARGIKIVILALLCLNLPSAFAGIVVGGTRVIFHGNDPDSTISIYNKEVDLPYLIQVWVDPFSKDDKSKPPFTVI
PPVSRLEPSQEKVLRIIKTAGELPKDRESVFWFNVKNIPPSSKNKDSSTLEIAIKTRIKLFWRPASITLIPEKAVAKVKW
YRQGSKLVVENNSPIHMNIMDVSVDGKDVPLNMIKPFEKLTLDLPTGVTGHALAWRFINDYGAISSPVKQAL
>Mature_231_residues
SLSMFARGIKIVILALLCLNLPSAFAGIVVGGTRVIFHGNDPDSTISIYNKEVDLPYLIQVWVDPFSKDDKSKPPFTVIP
PVSRLEPSQEKVLRIIKTAGELPKDRESVFWFNVKNIPPSSKNKDSSTLEIAIKTRIKLFWRPASITLIPEKAVAKVKWY
RQGSKLVVENNSPIHMNIMDVSVDGKDVPLNMIKPFEKLTLDLPTGVTGHALAWRFINDYGAISSPVKQAL

Specific function: Involved in the biogenesis of the F1C fimbriae [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1787171, Length=224, Percent_Identity=34.8214285714286, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1790771, Length=203, Percent_Identity=34.9753694581281, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1789532, Length=232, Percent_Identity=37.5, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1786333, Length=221, Percent_Identity=36.6515837104072, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1786936, Length=224, Percent_Identity=33.4821428571429, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1786743, Length=224, Percent_Identity=33.0357142857143, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI1788677, Length=197, Percent_Identity=34.5177664974619, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI87082203, Length=226, Percent_Identity=30.0884955752212, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788428, Length=226, Percent_Identity=30.9734513274336, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87081806, Length=231, Percent_Identity=27.7056277056277, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 25865; Mature: 25733

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSMFARGIKIVILALLCLNLPSAFAGIVVGGTRVIFHGNDPDSTISIYNKEVDLPYLI
CCHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCEEEEEECCCCCCEEEEEECCCCCCEEE
QVWVDPFSKDDKSKPPFTVIPPVSRLEPSQEKVLRIIKTAGELPKDRESVFWFNVKNIPP
EEEECCCCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
SSKNKDSSTLEIAIKTRIKLFWRPASITLIPEKAVAKVKWYRQGSKLVVENNSPIHMNIM
CCCCCCCCEEEEEEEEEEEEEEECCEEEEECHHHHHHHHEEECCCEEEEECCCCEEEEEE
DVSVDGKDVPLNMIKPFEKLTLDLPTGVTGHALAWRFINDYGAISSPVKQAL
EEEECCCCCCHHHHCCHHHEEEECCCCCCCHHHHEEEHHHCCCCCHHHHHCC
>Mature Secondary Structure 
SLSMFARGIKIVILALLCLNLPSAFAGIVVGGTRVIFHGNDPDSTISIYNKEVDLPYLI
CHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCEEEEEECCCCCCEEEEEECCCCCCEEE
QVWVDPFSKDDKSKPPFTVIPPVSRLEPSQEKVLRIIKTAGELPKDRESVFWFNVKNIPP
EEEECCCCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
SSKNKDSSTLEIAIKTRIKLFWRPASITLIPEKAVAKVKWYRQGSKLVVENNSPIHMNIM
CCCCCCCCEEEEEEEEEEEEEEECCEEEEECHHHHHHHHEEECCCEEEEECCCCEEEEEE
DVSVDGKDVPLNMIKPFEKLTLDLPTGVTGHALAWRFINDYGAISSPVKQAL
EEEECCCCCCHHHHCCHHHEEEECCCCCCCHHHHEEEHHHCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]