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The map label for this gene is stgA [H]

Identifier: 29143954

GI number: 29143954

Start: 3766087

End: 3766662

Strand: Direct

Name: stgA [H]

Synonym: t3659

Alternate gene names: 29143954

Gene position: 3766087-3766662 (Clockwise)

Preceding gene: 29143953

Following gene: 29143955

Centisome position: 78.59

GC content: 50.87

Gene sequence:

>576_bases
ATGAAACTGAATTTAATTGCCAGCGCTCTGGTTCTGTCTTCTACTATGCTGGTAGGTAATGCAATGGCATCTGATGGCAC
CGTTCACTTCCTTGGTGAAGTGGTTGACAGCACCTGCCAGGTTACGCCACAAACCGCTGATCAAAACGTTAATTTAGGCA
AAGTTAACAAAACGGCATTTGCTGGCGTGGGAAGTACCGCTGCGCCTACCGAGTTCCATATCGACCTGACCGGGTGCCCG
GCTACGTATACTAAGGCTGCCGTTCGTTTTGATGGTACCGAAGCTTCCAACAGCGATGGCGACCTGGCTATCGGCAACCC
TGCTAATGGCGATGCCCCGGGTGATTACACCGGTGACGGCGCTGCCATTACAGCATCTGGCGTAGCGATCCGTATTTACA
ACCGCGCGGATAACTCACAAGTTAAACTGTACAACGATTCTGCGTATAGCACGATTGATACCACAGCGGGTACGGCTTCT
ATGGAGTTTATCGCGCGTTATATCGCCACTGACGCAACCGTCACTGCGGGTACTGCTAACGCAGATTCTCAGTTCACTGT
CGAATACCAAAAATAA

Upstream 100 bases:

>100_bases
TATTTTCTCGGGAGTAGTATTCGCTTCCGTTGTAGACACATTGTGTTTTATTTATTTTTAAATGAAACATCGGGATATAT
AATATATCAATAGAGTTATA

Downstream 100 bases:

>100_bases
GATTCGCTCTTCTTAAACGTCTTTTATTAATTTATTGACGCCTGCCATTGTGAACAACTGTAGTTGTATAAATGCCCGGC
GTCTTTTTTATCCAGGGATG

Product: fimbrial subunit protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKLNLIASALVLSSTMLVGNAMASDGTVHFLGEVVDSTCQVTPQTADQNVNLGKVNKTAFAGVGSTAAPTEFHIDLTGCP
ATYTKAAVRFDGTEASNSDGDLAIGNPANGDAPGDYTGDGAAITASGVAIRIYNRADNSQVKLYNDSAYSTIDTTAGTAS
MEFIARYIATDATVTAGTANADSQFTVEYQK

Sequences:

>Translated_191_residues
MKLNLIASALVLSSTMLVGNAMASDGTVHFLGEVVDSTCQVTPQTADQNVNLGKVNKTAFAGVGSTAAPTEFHIDLTGCP
ATYTKAAVRFDGTEASNSDGDLAIGNPANGDAPGDYTGDGAAITASGVAIRIYNRADNSQVKLYNDSAYSTIDTTAGTAS
MEFIARYIATDATVTAGTANADSQFTVEYQK
>Mature_191_residues
MKLNLIASALVLSSTMLVGNAMASDGTVHFLGEVVDSTCQVTPQTADQNVNLGKVNKTAFAGVGSTAAPTEFHIDLTGCP
ATYTKAAVRFDGTEASNSDGDLAIGNPANGDAPGDYTGDGAAITASGVAIRIYNRADNSQVKLYNDSAYSTIDTTAGTAS
MEFIARYIATDATVTAGTANADSQFTVEYQK

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081753, Length=195, Percent_Identity=35.8974358974359, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87082421, Length=193, Percent_Identity=29.0155440414508, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790773, Length=175, Percent_Identity=31.4285714285714, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787174, Length=193, Percent_Identity=27.979274611399, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1790769, Length=170, Percent_Identity=36.4705882352941, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1786746, Length=163, Percent_Identity=31.2883435582822, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789531, Length=190, Percent_Identity=27.8947368421053, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19623; Mature: 19623

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS00086 CYTOCHROME_P450

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNLIASALVLSSTMLVGNAMASDGTVHFLGEVVDSTCQVTPQTADQNVNLGKVNKTAF
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCCEEECCCCCCCCCCCCCCCCEEE
AGVGSTAAPTEFHIDLTGCPATYTKAAVRFDGTEASNSDGDLAIGNPANGDAPGDYTGDG
ECCCCCCCCCEEEEEEECCCCHHCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCC
AAITASGVAIRIYNRADNSQVKLYNDSAYSTIDTTAGTASMEFIARYIATDATVTAGTAN
CEEEECCEEEEEEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCC
ADSQFTVEYQK
CCCEEEEEECC
>Mature Secondary Structure
MKLNLIASALVLSSTMLVGNAMASDGTVHFLGEVVDSTCQVTPQTADQNVNLGKVNKTAF
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCCEEECCCCCCCCCCCCCCCCEEE
AGVGSTAAPTEFHIDLTGCPATYTKAAVRFDGTEASNSDGDLAIGNPANGDAPGDYTGDG
ECCCCCCCCCEEEEEEECCCCHHCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCC
AAITASGVAIRIYNRADNSQVKLYNDSAYSTIDTTAGTASMEFIARYIATDATVTAGTAN
CEEEECCEEEEEEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCC
ADSQFTVEYQK
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1982455 [H]