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The map label for this gene is wzzE [H]

Identifier: 29143700

GI number: 29143700

Start: 3478053

End: 3479099

Strand: Reverse

Name: wzzE [H]

Synonym: t3378

Alternate gene names: 29143700

Gene position: 3479099-3478053 (Counterclockwise)

Preceding gene: 29143701

Following gene: 29143699

Centisome position: 72.6

GC content: 51.67

Gene sequence:

>1047_bases
ATGACACAACCATTACCGGGGGCACGCGCGGTGAGCGCTGAAAATGAACTGGATATTCGCGGGTTGTTTCGTACTTTATG
GGCTGGCAAATTCTGGATTATCGGCATTGGCCTGCTATTTGCCCTTATCGCGTTAGCCTATACCTTTTTTGCTCGTCAGG
AGTGGAGTGCGACGGCGATCACCGATCGCCCAACCGTAAATATGTTGGGCGGTTATTACTCCCAGCAGCAGTTTCTGCGC
AACCTGGATATTAAGACCGATCCTGCTTCTTCTGATAAGCCCTCGGTGATGGATGAAGCGTATAAAGAGTTCATCATGCA
ACTTGCCTCCTGGGATACGCGTCGCGATTTCTGGTTACAGACGGACTATTACAAGCAGCGAATGGTCGGGAATAGCAAAG
CTGATGCGGTGATGCTTGATGAACTGATCAATAACATACAGTTTACGCCCGGCGATTTTACACGCGCCATCAACGACAAC
GTGAGGCTGATTGCTGAAACTGCGCCGGATGCCAATAATCTGCTGCGTCAGTATGTCGCATTCGCCAGCCAGCGGGCGGC
GAGCCATCTGAATGATGAATTAAAAGGTGCCTGGGCTGCGCGTACCGTGCAGATGAAAGCCCAGGTCAAACGGCAGGAAG
AGGTTGCGAAAGCGATCTATTCGCGTCGTGTAAACAGTATTGAGCAGGCGCTCAAAATTGCGGAACAACATAATATTTCT
CGTAGCGCGACAGATGTCCCGGCGGATGAATTACCGGACTCAGAGCTTTTTTTACTCGGTCGCCCTATGTTGCAGGCGCG
TCTTGAAAATCTGCAAGCGGTTGGCCCTGCGTTCGATTTGGACTACTTTCAAAATCGGGCAATGTTGAATACGCTTAATG
TGGGGCCGACCCTGGACCCTCGTTTTCAGACCTATCGTTATTTGCGTACGCCGGAAGAACCGGTAAAACGTGATAGCCCA
CGCCGAGCCTTCCTGATGATTATGTGGGGTATCGTTGGGGCGCTAATCGGTGCGGGCGTTGCCTTAACCCGTCGCCGCAC
GATTTAG

Upstream 100 bases:

>100_bases
AGCGGGCCTGGAAGGTGGCGAGATTTATTAAGCGTGTGAAGCGTCGCCTGCGCAGGCAACGTAAGAACCGGCCAAACTTA
ACCAAGTAAATGAGGATACG

Downstream 100 bases:

>100_bases
CAACACCTCTGCAGTAGGGGGCTGGGCCCCTACTGTCTATTCGAAGAGAATCGATGTGAAAGTACTGACTGTATTTGGTA
CACGACCGGAGGCCATTAAG

Product: lipopolysaccharide biosynthesis protein WzzE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTQPLPGARAVSAENELDIRGLFRTLWAGKFWIIGIGLLFALIALAYTFFARQEWSATAITDRPTVNMLGGYYSQQQFLR
NLDIKTDPASSDKPSVMDEAYKEFIMQLASWDTRRDFWLQTDYYKQRMVGNSKADAVMLDELINNIQFTPGDFTRAINDN
VRLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTVQMKAQVKRQEEVAKAIYSRRVNSIEQALKIAEQHNIS
RSATDVPADELPDSELFLLGRPMLQARLENLQAVGPAFDLDYFQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSP
RRAFLMIMWGIVGALIGAGVALTRRRTI

Sequences:

>Translated_348_residues
MTQPLPGARAVSAENELDIRGLFRTLWAGKFWIIGIGLLFALIALAYTFFARQEWSATAITDRPTVNMLGGYYSQQQFLR
NLDIKTDPASSDKPSVMDEAYKEFIMQLASWDTRRDFWLQTDYYKQRMVGNSKADAVMLDELINNIQFTPGDFTRAINDN
VRLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTVQMKAQVKRQEEVAKAIYSRRVNSIEQALKIAEQHNIS
RSATDVPADELPDSELFLLGRPMLQARLENLQAVGPAFDLDYFQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSP
RRAFLMIMWGIVGALIGAGVALTRRRTI
>Mature_347_residues
TQPLPGARAVSAENELDIRGLFRTLWAGKFWIIGIGLLFALIALAYTFFARQEWSATAITDRPTVNMLGGYYSQQQFLRN
LDIKTDPASSDKPSVMDEAYKEFIMQLASWDTRRDFWLQTDYYKQRMVGNSKADAVMLDELINNIQFTPGDFTRAINDNV
RLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTVQMKAQVKRQEEVAKAIYSRRVNSIEQALKIAEQHNISR
SATDVPADELPDSELFLLGRPMLQARLENLQAVGPAFDLDYFQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPR
RAFLMIMWGIVGALIGAGVALTRRRTI

Specific function: Unknown

COG id: COG3765

COG function: function code M; Chain length determinant protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the wzzB/cld/rol family [H]

Homologues:

Organism=Escherichia coli, GI87082332, Length=345, Percent_Identity=90.7246376811594, Blast_Score=657, Evalue=0.0,
Organism=Escherichia coli, GI87082029, Length=345, Percent_Identity=23.768115942029, Blast_Score=101, Evalue=8e-23,
Organism=Escherichia coli, GI1786802, Length=358, Percent_Identity=22.0670391061453, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 39518; Mature: 39386

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPLPGARAVSAENELDIRGLFRTLWAGKFWIIGIGLLFALIALAYTFFARQEWSATAI
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
TDRPTVNMLGGYYSQQQFLRNLDIKTDPASSDKPSVMDEAYKEFIMQLASWDTRRDFWLQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEC
TDYYKQRMVGNSKADAVMLDELINNIQFTPGDFTRAINDNVRLIAETAPDANNLLRQYVA
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHH
FASQRAASHLNDELKGAWAARTVQMKAQVKRQEEVAKAIYSRRVNSIEQALKIAEQHNIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSATDVPADELPDSELFLLGRPMLQARLENLQAVGPAFDLDYFQNRAMLNTLNVGPTLDP
CCCCCCCHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCHHHEECCCCCCCCC
RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGALIGAGVALTRRRTI
HHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
TQPLPGARAVSAENELDIRGLFRTLWAGKFWIIGIGLLFALIALAYTFFARQEWSATAI
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
TDRPTVNMLGGYYSQQQFLRNLDIKTDPASSDKPSVMDEAYKEFIMQLASWDTRRDFWLQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEC
TDYYKQRMVGNSKADAVMLDELINNIQFTPGDFTRAINDNVRLIAETAPDANNLLRQYVA
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHH
FASQRAASHLNDELKGAWAARTVQMKAQVKRQEEVAKAIYSRRVNSIEQALKIAEQHNIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSATDVPADELPDSELFLLGRPMLQARLENLQAVGPAFDLDYFQNRAMLNTLNVGPTLDP
CCCCCCCHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCHHHEECCCCCCCCC
RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGALIGAGVALTRRRTI
HHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]