| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yigI [H]
Identifier: 29143667
GI number: 29143667
Start: 3443693
End: 3444160
Strand: Direct
Name: yigI [H]
Synonym: t3341
Alternate gene names: 29143667
Gene position: 3443693-3444160 (Clockwise)
Preceding gene: 29143663
Following gene: 29143668
Centisome position: 71.86
GC content: 56.84
Gene sequence:
>468_bases ATGTCCGCTGTACTTACCGCTGAACAAGCTCTGAAATTAGTGGGTGAAATGTTTGTCTACCACATGCCGTTTAATCGGGC GTTAGGGCTGGAGCTGGAACGCTATGAAAAAGCGTTCGCCCAACTGGCCTTCAACAACCAGCCGATGATGGTCGGCAACT GGGCGCAAAGCATTTTACACGGCGGCGTGATCGCCTCTGCGCTGGATGTCGCCGCCGGACTGGTATGCGTCGGCAGCACG CTAACTCGCCACGAAACCATCAGCGAAGATGAACTACGCCAGCGCCTGTCGCGGATGGGAACGATTGACCTGCGCGTCGA TTACCTGCGTCCGGGCAGAGGCAACCGCTTTACGGCCACCAGTAGCCTGCTGCGCGCAGGGAATAAAGTGGCCGTCGCCC GCGTGGAATTACACAATGAAGATCAGCTGTACATCGCCAGCGCCACCGCTACTTATATGGTGGGATAA
Upstream 100 bases:
>100_bases TTTACACACATAGCCGTTAGTTATCCCTTCTTAAAGTAGAAAACAACAATTAAGAAGCATAATATCAACATTTCATTAAC CAATGGAGTATCAGGAATCT
Downstream 100 bases:
>100_bases AAGCAGGTAAACTGTTGTTACACTTCAGATACGAGTTTTCCGGATGGACGCAAAACAAACACGGCAGGGCGTATTACTCG CTCTTGCCGCCTATTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSAVLTAEQALKLVGEMFVYHMPFNRALGLELERYEKAFAQLAFNNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGST LTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGNRFTATSSLLRAGNKVAVARVELHNEDQLYIASATATYMVG
Sequences:
>Translated_155_residues MSAVLTAEQALKLVGEMFVYHMPFNRALGLELERYEKAFAQLAFNNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGST LTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGNRFTATSSLLRAGNKVAVARVELHNEDQLYIASATATYMVG >Mature_154_residues SAVLTAEQALKLVGEMFVYHMPFNRALGLELERYEKAFAQLAFNNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTL TRHETISEDELRQRLSRMGTIDLRVDYLRPGRGNRFTATSSLLRAGNKVAVARVELHNEDQLYIASATATYMVG
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082336, Length=155, Percent_Identity=96.7741935483871, Blast_Score=310, Evalue=2e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 17044; Mature: 16913
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVLTAEQALKLVGEMFVYHMPFNRALGLELERYEKAFAQLAFNNQPMMVGNWAQSILH CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHH GGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGNRFTAT CHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCEEHHH SSLLRAGNKVAVARVELHNEDQLYIASATATYMVG HHHHHCCCEEEEEEEEECCCCEEEEEECCEEEECC >Mature Secondary Structure SAVLTAEQALKLVGEMFVYHMPFNRALGLELERYEKAFAQLAFNNQPMMVGNWAQSILH CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHH GGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGNRFTAT CHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCEEHHH SSLLRAGNKVAVARVELHNEDQLYIASATATYMVG HHHHHCCCEEEEEEEEECCCCEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]