Click here to switch to the map view.

The map label for this gene is hemG [H]

Identifier: 29143637

GI number: 29143637

Start: 3409480

End: 3410025

Strand: Reverse

Name: hemG [H]

Synonym: t3311

Alternate gene names: 29143637

Gene position: 3410025-3409480 (Counterclockwise)

Preceding gene: 29143638

Following gene: 29143623

Centisome position: 71.16

GC content: 50.18

Gene sequence:

>546_bases
GTGAAAACATTGATTCTTTTCTCTACCCGGGACGGACAAACGCGCGAAATTGCCTCTTATCTGGCTTCTGAACTCAAAGA
GATGGGGATCTGGGCCGATGTCGTTAATCTGCATCGCGCAGAAGAGCCTGACTGGGATAGCTATGATCGCGTAGTGATTG
GCGCGTCTATTCGTTATGGTCATTACCACAGCGCCTTTCAGGAGTTTGTTAAGAAATATGCCACGCGGTTGAACGGAATG
CCGAGCGCCTTTTATTCCGTTAACCTGGTGGCGCGTAAAGCTGAAAAACGGACGCCGCAGACTAACAGCTACGCGCGTAA
GTTTTTAATGAGTTCTCCGTGGCGACCTGACTACTGTGCCGTCATTGCAGGCGCGCTTCGCTATCCCCGCTATCGCTGGT
ATGACCGTCTGATGATCAAGCTTATTATGAAGATGTCGGGCGGCGAAACGGATACCAGTAAAGAAGTGGTGTACACCGAC
TGGGAGCAAGTTGCGCACTTTGCCCGTGAAATAGCCCATTTAACCAACAAATCGTCGGCAAAATAA

Upstream 100 bases:

>100_bases
AATGGATACTCATCGCCAACATGCTATTTGGTCGTCTGGAAGTATTCACTTTGCTGGTACTTTTTACCCCGACTTTCTGG
CGTGAATAATGGAGTAACAC

Downstream 100 bases:

>100_bases
ACGCAAAGAATAAAAAGTGCGCACTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCAGAAATAACTCCCTATAATGCG
CCACCACTGACACGGAACAA

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKTLILFSTRDGQTREIASYLASELKEMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYGHYHSAFQEFVKKYATRLNGM
PSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCAVIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTD
WEQVAHFAREIAHLTNKSSAK

Sequences:

>Translated_181_residues
MKTLILFSTRDGQTREIASYLASELKEMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYGHYHSAFQEFVKKYATRLNGM
PSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCAVIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTD
WEQVAHFAREIAHLTNKSSAK
>Mature_181_residues
MKTLILFSTRDGQTREIASYLASELKEMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYGHYHSAFQEFVKKYATRLNGM
PSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCAVIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTD
WEQVAHFAREIAHLTNKSSAK

Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]

COG id: COG4635

COG function: function code CH; Flavodoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790285, Length=181, Percent_Identity=88.3977900552486, Blast_Score=337, Evalue=2e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: NA

EC number: =1.3.5.3 [H]

Molecular weight: Translated: 21020; Mature: 21020

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLILFSTRDGQTREIASYLASELKEMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYG
CCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCEEEECEECCC
HYHSAFQEFVKKYATRLNGMPSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH
VIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTDWEQVAHFAREIAHLTNKSSA
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCC
K
C
>Mature Secondary Structure
MKTLILFSTRDGQTREIASYLASELKEMGIWADVVNLHRAEEPDWDSYDRVVIGASIRYG
CCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCEEEECEECCC
HYHSAFQEFVKKYATRLNGMPSAFYSVNLVARKAEKRTPQTNSYARKFLMSSPWRPDYCA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH
VIAGALRYPRYRWYDRLMIKLIMKMSGGETDTSKEVVYTDWEQVAHFAREIAHLTNKSSA
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]