Click here to switch to the map view.

The map label for this gene is yhdV [H]

Identifier: 29143636

GI number: 29143636

Start: 3402386

End: 3402607

Strand: Direct

Name: yhdV [H]

Synonym: t3305

Alternate gene names: 29143636

Gene position: 3402386-3402607 (Clockwise)

Preceding gene: 29143635

Following gene: 29143641

Centisome position: 71.0

GC content: 50.0

Gene sequence:

>222_bases
ATGAAAAGACTAATTCCAGTTGCATTGCTTACCACCTTATTGGCAGGTTGTGCACATGATTCTCCCTGCGTACCGGTTTA
TGACGATCAAGGGCGGCTGGTTCATACCAATACATGTATGAAAGGTACAACGCAGGATAACTGGGAGACAGCAGGCGCTA
TCGCTGGCGGCGCTGCGGCGGTAGCAGGGTTGACGATGGGTATCATTGCGCTTTCTAAATGA

Upstream 100 bases:

>100_bases
ATTTTTTCTGTGGTGGTAAAATAACTCTCGTTTTCACAGCGGTTAGAGCCAGCATTTACGTTGCTGTACTTTGCGAAACG
CTGATTAATGAGGTAACACC

Downstream 100 bases:

>100_bases
TACATGCAGGCGCGGCAATGCCGCGCTTTCAGTAATAATATAAAGGTCGTAAGGATACTCAGCGACGTAATCTATTCAGC
CTATCCCCGAAAGTTAACAC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MKRLIPVALLTTLLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAAVAGLTMGIIALSK

Sequences:

>Translated_73_residues
MKRLIPVALLTTLLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAAVAGLTMGIIALSK
>Mature_73_residues
MKRLIPVALLTTLLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAAVAGLTMGIIALSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789667, Length=73, Percent_Identity=98.6301369863014, Blast_Score=147, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7482; Mature: 7482

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIPVALLTTLLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAA
CCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHH
VAGLTMGIIALSK
HHHHHHHHEEECC
>Mature Secondary Structure
MKRLIPVALLTTLLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAA
CCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHH
VAGLTMGIIALSK
HHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]