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The map label for this gene is elbB [H]

Identifier: 29143578

GI number: 29143578

Start: 3329629

End: 3330282

Strand: Reverse

Name: elbB [H]

Synonym: t3244

Alternate gene names: 29143578

Gene position: 3330282-3329629 (Counterclockwise)

Preceding gene: 29143579

Following gene: 29143577

Centisome position: 69.5

GC content: 56.88

Gene sequence:

>654_bases
ATGAAAAAAATTGGCGTAGTGCTCAGCGGATGCGGCGTCTATGACGGCACCGAAATTCATGAGGCCGTTCTGACGCTGTT
GGCCATTGCCCGCAGCGGCGCGCAGGCTATCTGCTTCGCGCCGGATAAACCACAAGCGGATGTTATTAATCACCTGACCG
GCGAAGCTATGGCGGAAACGCGTAACGTCCTGATTGAGGCGGCGCGTATTACGCGGGGCGATATTCGTCCTCTGTCCCAG
GCTCAGCCAGAGGAACTGGATGCGCTCATTGTGCCTGGTGGTTTCGGCGCGGCGAAGAACCTGAGTAATTTCGCCAGCAA
GGGGAGCGAATGCCGGGTGGATAGCGATGTCGTCGCGCTGGCGAAGGCCATGCACCAGTCCGGCAAGCCGCTGGGATTCA
TCTGTATCGCGCCCGCAATGTTGCCGAAAATCTTTGACTTCCCGCTACGTCTGACAATAGGGACGGATATTGATACCGCT
GAAGTACTTGAAGAGATGGGGGCCGAACACGTACCTTGCCCGGTTGATGATATCGTTGTGGACGAGGATAACAAGGTCGT
GACCACCCCTGCCTATATGCTGGCGCAGGATATCGCCCAGGCGGCAAGCGGCATTGATAAATTAGTGTCGCGCGTGCTGG
TTCTGGCGGAATGA

Upstream 100 bases:

>100_bases
TCCTAAATGATTTGTTACATGAATCATTTAAATGTGTGAAGCGTAGCATTTTAATCAAAATTATTAATGGGCTTGAGTCG
GTTGCAGGAGGATGTTCACC

Downstream 100 bases:

>100_bases
GCAAACGACGCATCGCGCCGTTAACGTTTTTGCGCCGTCTACTTTTACGTATCCTTGCTGCGCTCGCCGTCTTTTGGGGC
GGCGGCATTGCGCTGTTTAG

Product: isoprenoid biosynthesis protein

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKKIGVVLSGCGVYDGTEIHEAVLTLLAIARSGAQAICFAPDKPQADVINHLTGEAMAETRNVLIEAARITRGDIRPLSQ
AQPEELDALIVPGGFGAAKNLSNFASKGSECRVDSDVVALAKAMHQSGKPLGFICIAPAMLPKIFDFPLRLTIGTDIDTA
EVLEEMGAEHVPCPVDDIVVDEDNKVVTTPAYMLAQDIAQAASGIDKLVSRVLVLAE

Sequences:

>Translated_217_residues
MKKIGVVLSGCGVYDGTEIHEAVLTLLAIARSGAQAICFAPDKPQADVINHLTGEAMAETRNVLIEAARITRGDIRPLSQ
AQPEELDALIVPGGFGAAKNLSNFASKGSECRVDSDVVALAKAMHQSGKPLGFICIAPAMLPKIFDFPLRLTIGTDIDTA
EVLEEMGAEHVPCPVDDIVVDEDNKVVTTPAYMLAQDIAQAASGIDKLVSRVLVLAE
>Mature_217_residues
MKKIGVVLSGCGVYDGTEIHEAVLTLLAIARSGAQAICFAPDKPQADVINHLTGEAMAETRNVLIEAARITRGDIRPLSQ
AQPEELDALIVPGGFGAAKNLSNFASKGSECRVDSDVVALAKAMHQSGKPLGFICIAPAMLPKIFDFPLRLTIGTDIDTA
EVLEEMGAEHVPCPVDDIVVDEDNKVVTTPAYMLAQDIAQAASGIDKLVSRVLVLAE

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=223, Percent_Identity=45.2914798206278, Blast_Score=186, Evalue=1e-47,
Organism=Homo sapiens, GI296531408, Length=223, Percent_Identity=39.0134529147982, Blast_Score=139, Evalue=1e-33,
Organism=Escherichia coli, GI87082228, Length=217, Percent_Identity=88.9400921658986, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22918; Mature: 22918

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVVLSGCGVYDGTEIHEAVLTLLAIARSGAQAICFAPDKPQADVINHLTGEAMAET
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH
RNVLIEAARITRGDIRPLSQAQPEELDALIVPGGFGAAKNLSNFASKGSECRVDSDVVAL
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHH
AKAMHQSGKPLGFICIAPAMLPKIFDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVDDIVV
HHHHHHCCCCEEEEEECHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEE
DEDNKVVTTPAYMLAQDIAQAASGIDKLVSRVLVLAE
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIGVVLSGCGVYDGTEIHEAVLTLLAIARSGAQAICFAPDKPQADVINHLTGEAMAET
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH
RNVLIEAARITRGDIRPLSQAQPEELDALIVPGGFGAAKNLSNFASKGSECRVDSDVVAL
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHH
AKAMHQSGKPLGFICIAPAMLPKIFDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVDDIVV
HHHHHHCCCCEEEEEECHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEE
DEDNKVVTTPAYMLAQDIAQAASGIDKLVSRVLVLAE
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]