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The map label for this gene is tnpA

Identifier: 29143369

GI number: 29143369

Start: 3108025

End: 3108483

Strand: Direct

Name: tnpA

Synonym: t3019

Alternate gene names: 29143369

Gene position: 3108025-3108483 (Clockwise)

Preceding gene: 29143366

Following gene: 29143373

Centisome position: 64.86

GC content: 45.97

Gene sequence:

>459_bases
ATGGGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATAGTTTTCGCGCCCAAATACCGAAGACA
AGCGTTCTATGGAGAGAAGCGTAGGGCAGTAGGCAGCATATTAAGAAAATTGTGTGAATGGAAAAACGTACGAATTCTGG
AAGCGGAATGTTGTGCAGATCATATTCACATGCTTCTGGAGATCCCGCCGAAGATGAGTGTGTCGAGTTTCATGGGATAT
CTGAAGGGTAAAAGTAGTCTGATGCTTTACGAGCAGTTTGGGGATCTAAAATTCAAATACAGGAACAGGGAGTTCTGGTG
CAGAGGGTACTATGTCGATACGGTGGGTAAGAATACGGCGAAGATACAGGACTACATAAAGCACCAGCTTGAAGAGGATA
AAATGGGTGAGCAATTATCGATCCCGTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAA

Upstream 100 bases:

>100_bases
TTTAGCTTTAAGTCAGTTATTAAAACCCCTTTTGATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAA
GAAATCAAAAGGGGGTCCCA

Downstream 100 bases:

>100_bases
CGAAGTTTGATGCAAATGTCAGATCGTATGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTACAGGCGCATCAGAAAA
ACCTCCGGCTATGCCGGAGG

Product: insertion sequence element IS200 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGY
LKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK

Sequences:

>Translated_152_residues
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGY
LKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
>Mature_151_residues
GDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYL
KGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK

Specific function: Involved in the transposition of the insertion sequence

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): T200_SALTI (P59697)

Other databases:

- EMBL:   Y09990
- EMBL:   Y09991
- EMBL:   AL627266
- EMBL:   AL627269
- EMBL:   AL627270
- EMBL:   AL627270
- EMBL:   AL627271
- EMBL:   AL627271
- EMBL:   AL627271
- EMBL:   AL627274
- EMBL:   AL627274
- EMBL:   AL627277
- EMBL:   AL627277
- EMBL:   AL627277
- EMBL:   AL627277
- EMBL:   AL627283
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- EMBL:   AE014613
- RefSeq:   NP_454994.1
- RefSeq:   NP_455678.1
- RefSeq:   NP_455853.1
- RefSeq:   NP_455994.1
- RefSeq:   NP_456194.1
- RefSeq:   NP_456235.1
- RefSeq:   NP_456281.1
- RefSeq:   NP_456816.1
- RefSeq:   NP_456944.1
- RefSeq:   NP_457394.1
- RefSeq:   NP_457405.1
- RefSeq:   NP_457475.1
- RefSeq:   NP_457499.1
- RefSeq:   NP_458843.1
- RefSeq:   NP_804319.1
- RefSeq:   NP_804919.1
- RefSeq:   NP_804965.1
- RefSeq:   NP_805004.1
- RefSeq:   NP_805337.1
- RefSeq:   NP_805510.1
- RefSeq:   NP_806000.1
- RefSeq:   NP_806194.1
- RefSeq:   NP_806603.1
- RefSeq:   NP_806614.1
- RefSeq:   NP_806687.1
- RefSeq:   NP_806711.1
- RefSeq:   NP_808047.1
- ProteinModelPortal:   P59697
- SMR:   P59697
- GeneID:   1067461
- GeneID:   1068135
- GeneID:   1068411
- GeneID:   1068570
- GeneID:   1068649
- GeneID:   1068662
- GeneID:   1069166
- GeneID:   1069350
- GeneID:   1070467
- GeneID:   1070571
- GeneID:   1070615
- GeneID:   1071028
- GeneID:   1071374
- GeneID:   1246912
- GeneID:   1247628
- GeneID:   1247809
- GeneID:   1247957
- GeneID:   1248165
- GeneID:   1248208
- GeneID:   1248255
- GeneID:   1248826
- GeneID:   1248962
- GeneID:   1249435
- GeneID:   1249446
- GeneID:   1249518
- GeneID:   1249542
- GeneID:   1250967
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t0456
- KEGG:   stt:t1105
- KEGG:   stt:t1154
- KEGG:   stt:t1197
- KEGG:   stt:t1554
- KEGG:   stt:t1735
- KEGG:   stt:t2258
- KEGG:   stt:t2464
- KEGG:   stt:t2909
- KEGG:   stt:t2920
- KEGG:   stt:t2995
- KEGG:   stt:t3019
- KEGG:   stt:t4460
- KEGG:   sty:STY0437
- KEGG:   sty:STY1225
- KEGG:   sty:STY1418
- KEGG:   sty:STY1580
- KEGG:   sty:STY1794
- KEGG:   sty:STY1844
- KEGG:   sty:STY1895
- KEGG:   sty:STY2497
- KEGG:   sty:STY2640
- KEGG:   sty:STY3140
- KEGG:   sty:STY3154
- KEGG:   sty:STY3234
- KEGG:   sty:STY3261
- KEGG:   sty:STY4765
- HOGENOM:   HBG758006
- OMA:   EASKNHI
- ProtClustDB:   CLSK893957
- BioCyc:   SENT209261:T0456-MONOMER
- BioCyc:   SENT209261:T1105-MONOMER
- BioCyc:   SENT209261:T1154-MONOMER
- BioCyc:   SENT209261:T1197-MONOMER
- BioCyc:   SENT209261:T1554-MONOMER
- BioCyc:   SENT209261:T1735-MONOMER
- BioCyc:   SENT209261:T2258-MONOMER
- BioCyc:   SENT209261:T2464-MONOMER
- BioCyc:   SENT209261:T2909-MONOMER
- BioCyc:   SENT209261:T2920-MONOMER
- BioCyc:   SENT209261:T2995-MONOMER
- BioCyc:   SENT209261:T3019-MONOMER
- BioCyc:   SENT209261:T4460-MONOMER
- BioCyc:   SENT220341:STY0437-MONOMER
- BioCyc:   SENT220341:STY1225-MONOMER
- BioCyc:   SENT220341:STY1418-MONOMER
- BioCyc:   SENT220341:STY1580-MONOMER
- BioCyc:   SENT220341:STY1794-MONOMER
- BioCyc:   SENT220341:STY1844-MONOMER
- BioCyc:   SENT220341:STY1895-MONOMER
- BioCyc:   SENT220341:STY2497-MONOMER
- BioCyc:   SENT220341:STY2640-MONOMER
- BioCyc:   SENT220341:STY3140-MONOMER
- BioCyc:   SENT220341:STY3154-MONOMER
- BioCyc:   SENT220341:STY3234-MONOMER
- BioCyc:   SENT220341:STY3261-MONOMER
- BioCyc:   SENT220341:STY4765-MONOMER
- InterPro:   IPR002686

Pfam domain/function: PF01797 Transposase_17

EC number: NA

Molecular weight: Translated: 17958; Mature: 17827

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCAD
CCCCCCCCEEECCCEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
HIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTA
HHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEEEEECCCCCHH
KIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
GDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCAD
CCCCCCCEEECCCEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
HIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTA
HHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEEEEECCCCCHH
KIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504