Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29143342
Identifier: 29143342
GI number: 29143342
Start: 3083091
End: 3083765
Strand: Direct
Name: 29143342
Synonym: t2992
Alternate gene names: NA
Gene position: 3083091-3083765 (Clockwise)
Preceding gene: 29143341
Following gene: 29143343
Centisome position: 64.34
GC content: 60.0
Gene sequence:
>675_bases TTGGCGGCCTGCACCACGCTGCTACTCCCTGCGCAGACCGTGTTCCCGGTTTATAGCGCGGCGGCCTTCCTCTGTCTGCT GGCGCTGAAATCAACGCGGCGGCGGGCGAAGTATGTCGCCTGGCTGATGCTGTCTTTAGGGTTTGGGCTATGGCTGGTAC ATGGCGGTTGGCTAACGGAATGGATAAGCGGGCAGCCTCGCGATCCGCAGCGCTGGGTATATGCCGTTACGCTATGGCTA CGTCTGCTGGCGATCGTGTCGACGTCGCAGCTATGGATGCAGTATGTGCCGGTTCAGCGGTTTATTCGCGCCCTGTTCGC TTCACGTCTGCCACCCGGCATCGCTTACCTGTTCGCTGGCCCGCTGCTGGTCGTCGAACAGCTCAAACGACAACTGACGA TCGTTCATGAAGCCCAGCGCGCGCGCGGCGTACCGCTGGATGAAGGCTGGTATCAGCGGCTACGGGCAATGCCTGCGCTG ATCGTGCCGCTTACGCAAAATGCGCTTAACGATCTGACAATACGCGGCGCGGCGTTGGATATGCGGGGGTTTCGGCTGCA TCGAGCCCGAACCACGCTGTGGGCGCCGAAAGATAGCATGTTACAACGGGTTGCGCGGTATGGCATGGTACTGCTAATAC TGGCGGAAGCGGGAGTATGGATATGGTTACGTTAG
Upstream 100 bases:
>100_bases GGTGCTGCTGCGTCAGCTACCGTTACGTACGACACGGCATTTTCCTGCGATGTCAGCCGTACGCTAAATGCATCCGTTTA CCTCGTTAACCTTATGGGCG
Downstream 100 bases:
>100_bases AGCAGTTTCGTTATCTTCCGTCCGATGCGACACGCCCGCCGGCATGTTTTGATTTCCACTATTCAACACCCGGAATAGTG GCGATAGTCGGCGATAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MAACTTLLLPAQTVFPVYSAAAFLCLLALKSTRRRAKYVAWLMLSLGFGLWLVHGGWLTEWISGQPRDPQRWVYAVTLWL RLLAIVSTSQLWMQYVPVQRFIRALFASRLPPGIAYLFAGPLLVVEQLKRQLTIVHEAQRARGVPLDEGWYQRLRAMPAL IVPLTQNALNDLTIRGAALDMRGFRLHRARTTLWAPKDSMLQRVARYGMVLLILAEAGVWIWLR
Sequences:
>Translated_224_residues MAACTTLLLPAQTVFPVYSAAAFLCLLALKSTRRRAKYVAWLMLSLGFGLWLVHGGWLTEWISGQPRDPQRWVYAVTLWL RLLAIVSTSQLWMQYVPVQRFIRALFASRLPPGIAYLFAGPLLVVEQLKRQLTIVHEAQRARGVPLDEGWYQRLRAMPAL IVPLTQNALNDLTIRGAALDMRGFRLHRARTTLWAPKDSMLQRVARYGMVLLILAEAGVWIWLR >Mature_223_residues AACTTLLLPAQTVFPVYSAAAFLCLLALKSTRRRAKYVAWLMLSLGFGLWLVHGGWLTEWISGQPRDPQRWVYAVTLWLR LLAIVSTSQLWMQYVPVQRFIRALFASRLPPGIAYLFAGPLLVVEQLKRQLTIVHEAQRARGVPLDEGWYQRLRAMPALI VPLTQNALNDLTIRGAALDMRGFRLHRARTTLWAPKDSMLQRVARYGMVLLILAEAGVWIWLR
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25564; Mature: 25433
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAACTTLLLPAQTVFPVYSAAAFLCLLALKSTRRRAKYVAWLMLSLGFGLWLVHGGWLTE CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH WISGQPRDPQRWVYAVTLWLRLLAIVSTSQLWMQYVPVQRFIRALFASRLPPGIAYLFAG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH PLLVVEQLKRQLTIVHEAQRARGVPLDEGWYQRLRAMPALIVPLTQNALNDLTIRGAALD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHEECCCEEC MRGFRLHRARTTLWAPKDSMLQRVARYGMVLLILAEAGVWIWLR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEC >Mature Secondary Structure AACTTLLLPAQTVFPVYSAAAFLCLLALKSTRRRAKYVAWLMLSLGFGLWLVHGGWLTE CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH WISGQPRDPQRWVYAVTLWLRLLAIVSTSQLWMQYVPVQRFIRALFASRLPPGIAYLFAG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH PLLVVEQLKRQLTIVHEAQRARGVPLDEGWYQRLRAMPALIVPLTQNALNDLTIRGAALD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHEECCCEEC MRGFRLHRARTTLWAPKDSMLQRVARYGMVLLILAEAGVWIWLR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA