Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is mutH [H]
Identifier: 29143266
GI number: 29143266
Start: 3005521
End: 3006216
Strand: Direct
Name: mutH [H]
Synonym: t2914
Alternate gene names: 29143266
Gene position: 3005521-3006216 (Clockwise)
Preceding gene: 29143252
Following gene: 29143267
Centisome position: 62.72
GC content: 57.9
Gene sequence:
>696_bases ATGTCCGCTCTTTGTCCGCTACTGACTCCGCCTGCTTCGGAAGCATTGCTGTTAGCCCAGGCGCGGCAGCTTTCCGGCTA TACGTTAGGCGAGCTGGCGGTGATGGCCGGCATTACCACGCCTAAAGATTTGAAGCGAGACAAAGGCTGGATCGGCGTCT TGCTGGAGATCTGGCTCGGCGCCAGCGCCGGGAGCAAGCCGGAGCAGGATTTCGCCGCGTTAGGCGTAGAACTGAAAACT ATCCCGGTGGATAGTCTGGGTCGTCCTCTGGAAACAACCTTTGTTTGCGTGGCGCCGTTAACCGGTAACAGCGGCGTGAC CTGGGAGACAAGTCACGTACGGCATAAATTGAAGCGCGTGCTATGGGTGCCGGTCGAAGGCGATCGCAGCATACCGTTAG CCGAACGCCGCGTAGGTTCGCCGCTACTCTGGAGTCCGAGTGAAGAAGAGGACAGGCAGCTACGCCTCGACTGGGAAGAG CTGATGGACATGATAGTGCTGGGCCAGGTGGAACGCATTACCGCCCGCCATGGCGAAGTCTTGCAACTGCGACCCAAAGC CGCCAATGCCAGGGCGCTCACCGAGGCTATCGGCGCGCGCGGGGAACCTATTTTGACGCTACCGCGTGGATTTTATCTGA AAAAAAATTTTACGCAGGCGCTGCTGGCTCGCCATTTTTTATTGCAGAATCCGTAA
Upstream 100 bases:
>100_bases GCAATAAAAATCAGTCTATTGAATATAAGACACAGAAAAAGATAAACTCTGCCCATACGGTATAAAAACACTGCTCATTT TTTGACCTAAGGTAATTGTC
Downstream 100 bases:
>100_bases CGTCCATTACACGCAAATGCGCCTCCGCTATGGCTACGCGTCGGGCCGACGCCGGATAAACGTAAGCGTATTGTCGCCGC TATTTTACACCGTTCCTGGT
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: Methyl-directed mismatch repair protein [H]
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSALCPLLTPPASEALLLAQARQLSGYTLGELAVMAGITTPKDLKRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKT IPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRVLWVPVEGDRSIPLAERRVGSPLLWSPSEEEDRQLRLDWEE LMDMIVLGQVERITARHGEVLQLRPKAANARALTEAIGARGEPILTLPRGFYLKKNFTQALLARHFLLQNP
Sequences:
>Translated_231_residues MSALCPLLTPPASEALLLAQARQLSGYTLGELAVMAGITTPKDLKRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKT IPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRVLWVPVEGDRSIPLAERRVGSPLLWSPSEEEDRQLRLDWEE LMDMIVLGQVERITARHGEVLQLRPKAANARALTEAIGARGEPILTLPRGFYLKKNFTQALLARHFLLQNP >Mature_230_residues SALCPLLTPPASEALLLAQARQLSGYTLGELAVMAGITTPKDLKRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTI PVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRVLWVPVEGDRSIPLAERRVGSPLLWSPSEEEDRQLRLDWEEL MDMIVLGQVERITARHGEVLQLRPKAANARALTEAIGARGEPILTLPRGFYLKKNFTQALLARHFLLQNP
Specific function: Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair [H]
COG id: COG3066
COG function: function code L; DNA mismatch repair protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mutH family [H]
Homologues:
Organism=Escherichia coli, GI1789196, Length=229, Percent_Identity=88.2096069868996, Blast_Score=410, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004230 - InterPro: IPR011337 - InterPro: IPR011335 [H]
Pfam domain/function: PF02976 MutH [H]
EC number: NA
Molecular weight: Translated: 25438; Mature: 25307
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALCPLLTPPASEALLLAQARQLSGYTLGELAVMAGITTPKDLKRDKGWIGVLLEIWLG CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHC ASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRV CCCCCCCCHHHHHHCCEEEEECHHHCCCCCCEEEEEEEEEECCCCCEEEHHHHHHHHHHE LWVPVEGDRSIPLAERRVGSPLLWSPSEEEDRQLRLDWEELMDMIVLGQVERITARHGEV EEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCE LQLRPKAANARALTEAIGARGEPILTLPRGFYLKKNFTQALLARHFLLQNP EEECCCCCCHHHHHHHHCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SALCPLLTPPASEALLLAQARQLSGYTLGELAVMAGITTPKDLKRDKGWIGVLLEIWLG CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHC ASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRV CCCCCCCCHHHHHHCCEEEEECHHHCCCCCCEEEEEEEEEECCCCCEEEHHHHHHHHHHE LWVPVEGDRSIPLAERRVGSPLLWSPSEEEDRQLRLDWEELMDMIVLGQVERITARHGEV EEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCE LQLRPKAANARALTEAIGARGEPILTLPRGFYLKKNFTQALLARHFLLQNP EEECCCCCCHHHHHHHHCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA