| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is srlE [H]
Identifier: 29143093
GI number: 29143093
Start: 2817613
End: 2818584
Strand: Direct
Name: srlE [H]
Synonym: t2734
Alternate gene names: 29143093
Gene position: 2817613-2818584 (Clockwise)
Preceding gene: 29143092
Following gene: 29143094
Centisome position: 58.8
GC content: 57.72
Gene sequence:
>972_bases ATGACACGGGTTCGCATTGAGAAAGGTGCCGGCGGCTGGGGCGGCCCGCTTGAACTGGACGTTACGCCAGGCAAAAAGAT CGTCTATATCACAGCCGGTACGCGCCCGGCGATCGTCGACAAACTGGCGCAACTAACAGGCTGGCAAGCGGTGGACGGCT TTAAAGAAGGCGAACCGCCGGAAGCGGAGATCGGCGCGGCCATTATCGACTGCGGCGGTACGCTGCGCTGCGGTATCTAC CCGAAACGCCGGATTCCAACCATTAATATTCACTCGACGGGTAAGTCCGGCCCACTGGCGCAGTATATTGTTGAAGATAT TTATGTCTCCGGCGTAAAAGAAGAAAACATTACTCTAGTCGGCGAAACATCTGCCAGACCCCAGCCTGCCAAAACGACAT TAGGACGTGACTACGACACCAGCAAAAAAATCACCGAGCAGAGCGACGGGCTGCTGGCAAAAGTCGGTATGGGAATGGGT TCTGCCGTGGCGGTACTGTTCCAGTCCGGTCGCGACACCATTGATACGGTCCTGAAAACAATTCTGCCGTTTATGGCGTT CGTTTCGGCGCTAATCGGCATCATTATGGCCTCAGGTCTTGGCGACTGGATCGCCCACGGCCTGGCGCCATTAGCCAGCC ATCCACTGGGGCTGGTGACGCTGGCATTGATCTGCTCTTTCCCGCTGCTGTCGCCCTTTCTCGGCCCAGGCGCGGTTATC GCTCAGGTTATTGGCGTTCTGATCGGCGTTCAGATAGGTCTGGGCAATATCCCCCCGCATCTGGCGCTGCCCGCCCTGTT CGCGATTAACGCGCAGGCGGCCTGCGACTTTATCCCGGTCGGCCTGTCACTGGCGGAAGCGAAACAAGACACCGTTCGCG TCGGCGTACCTTCTGTGCTGGTCGGACGCTTCCTGACCGGCGCGCCCACGGTACTTATCGCCTGGTTTGTTTCCGGCTTT ATCTATCAATAA
Upstream 100 bases:
>100_bases ACTTCTTCCGCGGTTGGGTCACCGATCTCACCACCGCTATTTTTGAGAAAAAAATGGGGATTCAACTTGAGCAGAAAGTT CATCTGACAGGAGCGGTATC
Downstream 100 bases:
>100_bases GAGGTTCAGACATGAGCGTGATTTATCAAACCACCATCACCCGCATCGGCCAGAGCGCGATGGAGGCGCTCGGCGAAAAG ATGCTGATTACGTTTCGGGA
Product: PTS system glucitol/sorbitol-specific transporter subunit IIBC
Products: NA
Alternate protein names: EII-Gut; PTS system glucitol/sorbitol-specific EIIB component [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQLTGWQAVDGFKEGEPPEAEIGAAIIDCGGTLRCGIY PKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITLVGETSARPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMG SAVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVI AQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEAKQDTVRVGVPSVLVGRFLTGAPTVLIAWFVSGF IYQ
Sequences:
>Translated_323_residues MTRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQLTGWQAVDGFKEGEPPEAEIGAAIIDCGGTLRCGIY PKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITLVGETSARPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMG SAVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVI AQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEAKQDTVRVGVPSVLVGRFLTGAPTVLIAWFVSGF IYQ >Mature_322_residues TRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQLTGWQAVDGFKEGEPPEAEIGAAIIDCGGTLRCGIYP KRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITLVGETSARPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMGS AVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVIA QVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEAKQDTVRVGVPSVLVGRFLTGAPTVLIAWFVSGFI YQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3732
COG function: function code G; Phosphotransferase system sorbitol-specific component IIBC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-5 domain [H]
Homologues:
Organism=Escherichia coli, GI48994905, Length=323, Percent_Identity=92.8792569659443, Blast_Score=596, Evalue=1e-172,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011638 - InterPro: IPR011618 - InterPro: IPR004702 [H]
Pfam domain/function: PF07663 EIIBC-GUT_C; PF03612 EIIBC-GUT_N [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 33715; Mature: 33584
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS51102 PTS_EIIB_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQLTGWQAVDGFKEGEPP CCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCHHHCCCCCCCCC EAEIGAAIIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITLV CHHHCEEEEECCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEE GETSARPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMGSAVAVLFQSGRDTIDTVLKT ECCCCCCCCCHHHCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHH ILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVI HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH AQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEAKQDTVRVGVPSVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCEEECCCHHHHHCCCCEECCCHHHH VGRFLTGAPTVLIAWFVSGFIYQ HHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TRVRIEKGAGGWGGPLELDVTPGKKIVYITAGTRPAIVDKLAQLTGWQAVDGFKEGEPP CEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCHHHCCCCCCCCC EAEIGAAIIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITLV CHHHCEEEEECCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEE GETSARPQPAKTTLGRDYDTSKKITEQSDGLLAKVGMGMGSAVAVLFQSGRDTIDTVLKT ECCCCCCCCCHHHCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHH ILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVTLALICSFPLLSPFLGPGAVI HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH AQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEAKQDTVRVGVPSVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCEEECCCHHHHHCCCCEECCCHHHH VGRFLTGAPTVLIAWFVSGFIYQ HHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3553176; 9205837; 9278503 [H]