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The map label for this gene is tcfA [H]

Identifier: 29142932

GI number: 29142932

Start: 2628639

End: 2629349

Strand: Reverse

Name: tcfA [H]

Synonym: t2550

Alternate gene names: 29142932

Gene position: 2629349-2628639 (Counterclockwise)

Preceding gene: 29142933

Following gene: 29142931

Centisome position: 54.87

GC content: 48.8

Gene sequence:

>711_bases
ATGAATTTTAAAGATACTCTTCCCGGGGTGTTTCTCTGTGTCGCTATGTTTGCATGTGGTCATGCCAGGGCGAATATGCT
CGTTTATCCCATGGCGGCAGAAATTAATAGTAGCCGCGAAGAGGCCACCTCGCTGTTCGTCTATTCTAAATCAGATCATG
TGCAATATATTCGAACAAGAATCATGCGTATTGAACACCCCGGTATGCCACAGGAGAAGGAGGTACCAGCAGGGAATGAT
ATAGAGACAGGACTTGTTGTCTCCCCGGAGAAATTTGCTCTTTCCCCGGGAACAAAAAAAACAATACGTGTTATCAGTAC
TCAGGCACCGGAAAGAGAGGAAGCCTGGCGGGTATACTTCGAGGCTGTTCCTGAACTGGAAGATGATCCACAGGCAGGCG
GAAAGCAAAATTCATCCGTAAGTGTGAATCTTGTCTGGGGGGTGTTGCTGCGTGTTTCTCCGTCAGACCCCAGGCCTGCG
CTGGTAACGGACGGTCACCACCTGCTGAATACGGGAAACACACGGCTTTCTCTTATTCGGGCTGGCAACTGCGACACCAC
ATGCCACTGGCAGAATATAGGCAAAAGTATTTATCCCGGCGGGAGTGCTGATATTCCGGCCGGAATAAAAAGTAATGCAT
TTCGTGTGGAATATCGTACGGGTGCAAATTCACCGGTAATCTCTGCTGATTTAACAGCAGCCGGAAAGTAA

Upstream 100 bases:

>100_bases
AATGTATTAACACTGAATCGTAATTTGCTTCTTTATGCTGATAACTTTCTGTCTATGCTAATACTAAAATTTAGATGACT
TTTATACGGTAAAATCTGGT

Downstream 100 bases:

>100_bases
AAACACACGGAGCGTACGCTATACCCTACATTTATTCTCAGGGGGAGCGGATGTATACCGAGTGTACATATATCACTGTA
ATAAACAACAAAGCAAGGTT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNFKDTLPGVFLCVAMFACGHARANMLVYPMAAEINSSREEATSLFVYSKSDHVQYIRTRIMRIEHPGMPQEKEVPAGND
IETGLVVSPEKFALSPGTKKTIRVISTQAPEREEAWRVYFEAVPELEDDPQAGGKQNSSVSVNLVWGVLLRVSPSDPRPA
LVTDGHHLLNTGNTRLSLIRAGNCDTTCHWQNIGKSIYPGGSADIPAGIKSNAFRVEYRTGANSPVISADLTAAGK

Sequences:

>Translated_236_residues
MNFKDTLPGVFLCVAMFACGHARANMLVYPMAAEINSSREEATSLFVYSKSDHVQYIRTRIMRIEHPGMPQEKEVPAGND
IETGLVVSPEKFALSPGTKKTIRVISTQAPEREEAWRVYFEAVPELEDDPQAGGKQNSSVSVNLVWGVLLRVSPSDPRPA
LVTDGHHLLNTGNTRLSLIRAGNCDTTCHWQNIGKSIYPGGSADIPAGIKSNAFRVEYRTGANSPVISADLTAAGK
>Mature_236_residues
MNFKDTLPGVFLCVAMFACGHARANMLVYPMAAEINSSREEATSLFVYSKSDHVQYIRTRIMRIEHPGMPQEKEVPAGND
IETGLVVSPEKFALSPGTKKTIRVISTQAPEREEAWRVYFEAVPELEDDPQAGGKQNSSVSVNLVWGVLLRVSPSDPRPA
LVTDGHHLLNTGNTRLSLIRAGNCDTTCHWQNIGKSIYPGGSADIPAGIKSNAFRVEYRTGANSPVISADLTAAGK

Specific function: Might function as a shuttle protein in the transport of fimbria through the periplasmic space or might function as an adhesin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25682; Mature: 25682

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKDTLPGVFLCVAMFACGHARANMLVYPMAAEINSSREEATSLFVYSKSDHVQYIRTR
CCCCHHCCHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCHHHHEEEEEEECCCHHHHHHHH
IMRIEHPGMPQEKEVPAGNDIETGLVVSPEKFALSPGTKKTIRVISTQAPEREEAWRVYF
HHEECCCCCCCCCCCCCCCCCCCCEEECCHHEEECCCCCCEEEEEECCCCCHHHHHHHHH
EAVPELEDDPQAGGKQNSSVSVNLVWGVLLRVSPSDPRPALVTDGHHLLNTGNTRLSLIR
HHCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCEEECCCCEEEEEE
AGNCDTTCHWQNIGKSIYPGGSADIPAGIKSNAFRVEYRTGANSPVISADLTAAGK
CCCCCCEEEHHHCCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCC
>Mature Secondary Structure
MNFKDTLPGVFLCVAMFACGHARANMLVYPMAAEINSSREEATSLFVYSKSDHVQYIRTR
CCCCHHCCHHHHHHHHHHCCCCCCCEEEEEEHHHCCCCHHHHEEEEEEECCCHHHHHHHH
IMRIEHPGMPQEKEVPAGNDIETGLVVSPEKFALSPGTKKTIRVISTQAPEREEAWRVYF
HHEECCCCCCCCCCCCCCCCCCCCEEECCHHEEECCCCCCEEEEEECCCCCHHHHHHHHH
EAVPELEDDPQAGGKQNSSVSVNLVWGVLLRVSPSDPRPALVTDGHHLLNTGNTRLSLIR
HHCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCEEECCCCEEEEEE
AGNCDTTCHWQNIGKSIYPGGSADIPAGIKSNAFRVEYRTGANSPVISADLTAAGK
CCCCCCEEEHHHCCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1679404 [H]