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The map label for this gene is gmhA [H]

Identifier: 29142922

GI number: 29142922

Start: 2615908

End: 2616486

Strand: Reverse

Name: gmhA [H]

Synonym: t2540

Alternate gene names: 29142922

Gene position: 2616486-2615908 (Counterclockwise)

Preceding gene: 29142927

Following gene: 29142921

Centisome position: 54.6

GC content: 48.19

Gene sequence:

>579_bases
ATGTACCAGGATCTTATTCGTAACGAACTGAACGAAGCGGCGGAAACGCTGGCTAATTTTTTAAAAGATGACGCCAATAT
TCACGCCATTCAGCGCGCGGCGGTCCTGTTGGCTGACAGTTTTAAAGCGGGTGGTAAGGTACTTTCCTGCGGTAACGGCG
GCTCCCATTGCGATGCGATGCACTTTGCTGAAGAGCTGACAGGTCGTTATCGTGAAAATCGTCCGGGCTACCCGGCAATT
GCGATTTCTGATGTTAGCCATATATCCTGCGTCAGTAATGATTTTGGCTATGACTATATTTTCTCTCGTTACGTTGAGGC
GGTAGGGCGCGAAGGCGATGTCCTGTTAGGGATCTCGACGTCGGGTAACTCTGGTAACGTGATTAAAGCGATTGCCGCGG
CCCGTGAAAAAGGCATGAAAGTGATTACGTTGACCGGCAAAGACGGCGGCAAAATGGCGGGAACGGCGGATATTGAAATT
CGCGTACCGCACTTCGGTTATGCCGATCGTATTCAGGAAATTCATATCAAAGTGATTCATATCCTGATTCAGTTGATCGA
AAAAGAGATGGTTAAATAA

Upstream 100 bases:

>100_bases
ATCAAAAGCGTGAGGCGTTAATTCGGCTTATGCTTCTCGCCTGTACTGCTATCCGGTACACTGCATACTGTCATTTACAT
TCATGCTGAAGGATATCCTC

Downstream 100 bases:

>100_bases
GCCGATAATTTTTGCCGGTCTTATCGGGCCTGGAACGAGTAGGCCCGATAAGCGAAGCGCCATCGGGCATTGTGCCGGAT
GGCGACGCAAGCGTCTTATC

Product: phosphoheptose isomerase

Products: NA

Alternate protein names: Sedoheptulose 7-phosphate isomerase [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAI
AISDVSHISCVSNDFGYDYIFSRYVEAVGREGDVLLGISTSGNSGNVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK

Sequences:

>Translated_192_residues
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAI
AISDVSHISCVSNDFGYDYIFSRYVEAVGREGDVLLGISTSGNSGNVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
>Mature_192_residues
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAI
AISDVSHISCVSNDFGYDYIFSRYVEAVGREGDVLLGISTSGNSGNVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK

Specific function: Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate [H]

COG id: COG0279

COG function: function code G; Phosphoheptose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1786416, Length=192, Percent_Identity=97.3958333333333, Blast_Score=381, Evalue=1e-107,
Organism=Escherichia coli, GI1789539, Length=166, Percent_Identity=42.7710843373494, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004515
- InterPro:   IPR020620
- InterPro:   IPR001347 [H]

Pfam domain/function: PF01380 SIS [H]

EC number: =5.3.1.28 [H]

Molecular weight: Translated: 20896; Mature: 20896

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
HFAEELTGRYRENRPGYPAIAISDVSHISCVSNDFGYDYIFSRYVEAVGREGDVLLGIST
HHHHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
SGNSGNVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIH
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
ILIQLIEKEMVK
HHHHHHHHHHCC
>Mature Secondary Structure
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
HFAEELTGRYRENRPGYPAIAISDVSHISCVSNDFGYDYIFSRYVEAVGREGDVLLGIST
HHHHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
SGNSGNVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIH
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
ILIQLIEKEMVK
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA