| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29142900
Identifier: 29142900
GI number: 29142900
Start: 2591190
End: 2591738
Strand: Reverse
Name: 29142900
Synonym: t2516
Alternate gene names: NA
Gene position: 2591738-2591190 (Counterclockwise)
Preceding gene: 29142901
Following gene: 29142899
Centisome position: 54.09
GC content: 40.07
Gene sequence:
>549_bases ATGCATTTCCATAAAAGAACGTTATTAAGCGTGGCGACGCTTGGTATGTTGGCTGTTTCAGTCGTACTGATGGTAGTTTG GGTACGAAACAGTAACCATAGTTCTATTAATACTAATGAATTTTTATGTACGACAAGAACGGTAACGACGATACAGCCTA AAGATATCCATGCCGATGGCAGTCTTGTTCTTGATTTTAAGATGAAGAGAATTACGCTTCAATATGAAATAAAAACAAAA GATAACGGTGTAAAAATATTATACCGGGACGTGTATATGAAAAATTTACATCGAACAGCGCCTGGTGTTTATACGTTCGA AGTATCCCAGGTAAAAGTCTTTGCCACGGACACGGCTGGCGATCTGTTATCATATTTACGGGTTCTGCATCCGGAAGCGG CTAATGAGATTCGAATATCTAAAGTGGGTGAGAAAACCTTTTTTATTCTCTTAATCGGCAGCTTTATAACGTTTGTACCG CGCAGTAGATCTGAATGTTGTCTGAATGCGTCAGAAAGCGAGTTGCGAAATTGCCCTCGGCAAGGGTAA
Upstream 100 bases:
>100_bases AAATACATAAACAAAACGGAAAAATCATTTATTACATTCGCGTTCCTAATACAAATATTTTTGTCCAGTGTCTTAACCAA CTTGATATAGCGGAGCCGAA
Downstream 100 bases:
>100_bases AGGTTAACTCAATAATCAATTAAAATGCATATAAAACAATGAGTTATGAATTTTTGACTCGACAGGGAGGTAACTGATAC TCGCTGATAACCTCTCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTTRTVTTIQPKDIHADGSLVLDFKMKRITLQYEIKTK DNGVKILYRDVYMKNLHRTAPGVYTFEVSQVKVFATDTAGDLLSYLRVLHPEAANEIRISKVGEKTFFILLIGSFITFVP RSRSECCLNASESELRNCPRQG
Sequences:
>Translated_182_residues MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTTRTVTTIQPKDIHADGSLVLDFKMKRITLQYEIKTK DNGVKILYRDVYMKNLHRTAPGVYTFEVSQVKVFATDTAGDLLSYLRVLHPEAANEIRISKVGEKTFFILLIGSFITFVP RSRSECCLNASESELRNCPRQG >Mature_182_residues MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTTRTVTTIQPKDIHADGSLVLDFKMKRITLQYEIKTK DNGVKILYRDVYMKNLHRTAPGVYTFEVSQVKVFATDTAGDLLSYLRVLHPEAANEIRISKVGEKTFFILLIGSFITFVP RSRSECCLNASESELRNCPRQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20625; Mature: 20625
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTTRTVTTIQPKDIHADG CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECEEEEECCCCCCCCC SLVLDFKMKRITLQYEIKTKDNGVKILYRDVYMKNLHRTAPGVYTFEVSQVKVFATDTAG CEEEEEEEEEEEEEEEEEECCCCEEEEEHHHHHHHHHHCCCCEEEEEEEEEEEEEECCHH DLLSYLRVLHPEAANEIRISKVGEKTFFILLIGSFITFVPRSRSECCLNASESELRNCPR HHHHHHHHHCCCCCCCEEEEECCCCEEEEHHHHHHHHHCCCCCCHHCCCCCHHHHHCCCC QG CC >Mature Secondary Structure MHFHKRTLLSVATLGMLAVSVVLMVVWVRNSNHSSINTNEFLCTTRTVTTIQPKDIHADG CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECEEEEECCCCCCCCC SLVLDFKMKRITLQYEIKTKDNGVKILYRDVYMKNLHRTAPGVYTFEVSQVKVFATDTAG CEEEEEEEEEEEEEEEEEECCCCEEEEEHHHHHHHHHHCCCCEEEEEEEEEEEEEECCHH DLLSYLRVLHPEAANEIRISKVGEKTFFILLIGSFITFVPRSRSECCLNASESELRNCPR HHHHHHHHHCCCCCCCEEEEECCCCEEEEHHHHHHHHHCCCCCCHHCCCCCHHHHHCCCC QG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA