| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29142901
Identifier: 29142901
GI number: 29142901
Start: 2591711
End: 2592454
Strand: Reverse
Name: 29142901
Synonym: t2517
Alternate gene names: NA
Gene position: 2592454-2591711 (Counterclockwise)
Preceding gene: 29142902
Following gene: 29142900
Centisome position: 54.1
GC content: 39.52
Gene sequence:
>744_bases ATGAGTCAGAACAATTATCTGATTGACAAAAGGGTTATTCTTGATTGTGAACGAATGACGCTTTCCTGCGCCGGAGAGTT GATAACGATATCTGAATCGGAACGCAGTTTGCTTATCACTTTTTATGAAGGCCTTTTTAAAAAAGATGATTTAATTAACT ATGTCTGGGGGCGCAAAGGTGTTGTGGTCTCTGATGCCAGTTATTATAAACTGATTAACCAGCTACGAGGATCATTTGAT AAAATTGGTCTTAAGGGGGAGTCTGTTGTGACTCGCCCTCGCGTGGGTGTTTTACTCTCAGTTTCCATTGAACCGTTGAG TGATGAGGCGCAAGATATGCCGTTGCCTGCTGTTGCTGAAACAGAATTATCGACGGTTGAAGTGCGGCACGATGATACTA TTATTCCCCCAATACCGGGCGCTGTGAATAGAAAAGATTGGCTCTACTTTTGCCTGGCCGCGCTTCTGATGTTTTTTATG ATTTATAAAGTTAAGGGTGAAAATATTGATTATTTTACCCTCAATGGTTCGTATGATGGATACACTTTTTATAGTGTCGG GCATGATAAAACCCATCTGGCGGATATCATTGAAGCGTACTCTGAGATGAGTAATGAAATACATAAACAAAACGGAAAAA TCATTTATTACATTCGCGTTCCTAATACAAATATTTTTGTCCAGTGTCTTAACCAACTTGATATAGCGGAGCCGAAATGC ATTTCCATAAAAGAACGTTATTAA
Upstream 100 bases:
>100_bases ATGCAGGAACTCGCTACGGAAAAAAATTCAATAGCACGATATATCCTAGTAATATGTTTATGCCGTGAAGAAACGTGATA GCACTGGGGCGGATATTTTT
Downstream 100 bases:
>100_bases GCGTGGCGACGCTTGGTATGTTGGCTGTTTCAGTCGTACTGATGGTAGTTTGGGTACGAAACAGTAACCATAGTTCTATT AATACTAATGAATTTTTATG
Product: transmembrane regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Inner Membrane Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSQNNYLIDKRVILDCERMTLSCAGELITISESERSLLITFYEGLFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFD KIGLKGESVVTRPRVGVLLSVSIEPLSDEAQDMPLPAVAETELSTVEVRHDDTIIPPIPGAVNRKDWLYFCLAALLMFFM IYKVKGENIDYFTLNGSYDGYTFYSVGHDKTHLADIIEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC ISIKERY
Sequences:
>Translated_247_residues MSQNNYLIDKRVILDCERMTLSCAGELITISESERSLLITFYEGLFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFD KIGLKGESVVTRPRVGVLLSVSIEPLSDEAQDMPLPAVAETELSTVEVRHDDTIIPPIPGAVNRKDWLYFCLAALLMFFM IYKVKGENIDYFTLNGSYDGYTFYSVGHDKTHLADIIEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC ISIKERY >Mature_246_residues SQNNYLIDKRVILDCERMTLSCAGELITISESERSLLITFYEGLFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFDK IGLKGESVVTRPRVGVLLSVSIEPLSDEAQDMPLPAVAETELSTVEVRHDDTIIPPIPGAVNRKDWLYFCLAALLMFFMI YKVKGENIDYFTLNGSYDGYTFYSVGHDKTHLADIIEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKCI SIKERY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28180; Mature: 28049
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNNYLIDKRVILDCERMTLSCAGELITISESERSLLITFYEGLFKKDDLINYVWGRKG CCCCCEEEEEEEEEEHHHHEEECCCCEEEEECCCCEEEEEEHHHHCCCCCHHHHHCCCCC VVVSDASYYKLINQLRGSFDKIGLKGESVVTRPRVGVLLSVSIEPLSDEAQDMPLPAVAE EEEECHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCEEEEEEECCCCCCHHCCCCCCCCC TELSTVEVRHDDTIIPPIPGAVNRKDWLYFCLAALLMFFMIYKVKGENIDYFTLNGSYDG CCCEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC YTFYSVGHDKTHLADIIEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCE ISIKERY EEEECCC >Mature Secondary Structure SQNNYLIDKRVILDCERMTLSCAGELITISESERSLLITFYEGLFKKDDLINYVWGRKG CCCCEEEEEEEEEEHHHHEEECCCCEEEEECCCCEEEEEEHHHHCCCCCHHHHHCCCCC VVVSDASYYKLINQLRGSFDKIGLKGESVVTRPRVGVLLSVSIEPLSDEAQDMPLPAVAE EEEECHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCEEEEEEECCCCCCHHCCCCCCCCC TELSTVEVRHDDTIIPPIPGAVNRKDWLYFCLAALLMFFMIYKVKGENIDYFTLNGSYDG CCCEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC YTFYSVGHDKTHLADIIEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCE ISIKERY EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA