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The map label for this gene is rpmJ [H]

Identifier: 29142778

GI number: 29142778

Start: 2461482

End: 2461622

Strand: Reverse

Name: rpmJ [H]

Synonym: t2390

Alternate gene names: 29142778

Gene position: 2461622-2461482 (Counterclockwise)

Preceding gene: 29142779

Following gene: 29142771

Centisome position: 51.37

GC content: 43.26

Gene sequence:

>141_bases
ATGCAGGTGTTAAACTCACTTCGCAATGCAAAACAACGGCATCCGGATTGCCAGATAGTCAAACGCAAAGGACGCTTATA
CGTGATTTGTAAAACAAATCCGCGTTTTAAGGCGGTTCAGGGGCGTAAAAAAAGACGTTAA

Upstream 100 bases:

>100_bases
TTTATACCGGTAGACAGAAAACGTTTGATAGCGAAAGTAGCGCCGCACGCTTCCAGAAACGTTTTGGTCATTTTATCGGC
GCTAAACGGGGGTAAATGAA

Downstream 100 bases:

>100_bases
AAAACCAACAGTTCAGGGAAAGCAGTGCGTACCAGGGAGGGTGCGCACTTTTTTATTACCGGCTGGCTTCTGCGCGGGCC
AGCGTAAAAATATCGTAGAA

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MQVLNSLRNAKQRHPDCQIVKRKGRLYVICKTNPRFKAVQGRKKRR

Sequences:

>Translated_46_residues
MQVLNSLRNAKQRHPDCQIVKRKGRLYVICKTNPRFKAVQGRKKRR
>Mature_46_residues
MQVLNSLRNAKQRHPDCQIVKRKGRLYVICKTNPRFKAVQGRKKRR

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family [H]

Homologues:

Organism=Escherichia coli, GI87081713, Length=46, Percent_Identity=89.1304347826087, Blast_Score=88, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000473 [H]

Pfam domain/function: PF00444 Ribosomal_L36 [H]

EC number: NA

Molecular weight: Translated: 5521; Mature: 5521

Theoretical pI: Translated: 12.33; Mature: 12.33

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLNSLRNAKQRHPDCQIVKRKGRLYVICKTNPRFKAVQGRKKRR
CHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQVLNSLRNAKQRHPDCQIVKRKGRLYVICKTNPRFKAVQGRKKRR
CHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA