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The map label for this gene is ybbJ [H]

Identifier: 29142750

GI number: 29142750

Start: 2426452

End: 2426904

Strand: Direct

Name: ybbJ [H]

Synonym: t2360

Alternate gene names: 29142750

Gene position: 2426452-2426904 (Clockwise)

Preceding gene: 29142749

Following gene: 29142752

Centisome position: 50.64

GC content: 60.26

Gene sequence:

>453_bases
ATGATAGCGATGATTCTGGTACATCCACATATCTTCTGGCTTAGCCTCGGCGGCCTGTTGTTGGCTGCGGAAATGCTCGG
CGGTAACGGCTATTTGCTGTGGAGCGGCGTGGCGGCAGTGATTACCGGCTTAACCGTCTGGCTCTTACCGCTCGGCTGGG
AATGGCAGGGCGTGCTGTTTGCGGCCTTAACGTTGCTGGCGGCCTGGCTTTGGTGGCGCTGGCTGGCGCGTCGCGTGCGG
GAACAAAAGCCGACCGACAGCCGCCTTAACCAACGCGGACAACAACTGGTAGGCCGCCGGTTTATGCTTGATGCCGCGTT
AGTGAACGGACGGGGTCATATGCGTGTCGGTGACAGCTCGTGGCCGGTATGCGCTGACGAAGACCTGCGCGCAGGTACGC
ATGTCGAAGTGATCGCCGTGGAAGGCATCACCCTACGCATTCGCGCCGTTTAA

Upstream 100 bases:

>100_bases
GCAAAGTGGTCATGATGCCGCTGGATGCCAGCAGTCTGATGGGCGCTATCGCCGGGATCAGCGAGCTGGTTAAGGACAGC
GCCAGCGAACGGAAAAAAGC

Downstream 100 bases:

>100_bases
TCAACGTAACTTTTGCGCCTTGTGATGACAGCAGCCGGAAAGATTATCAATAATCGGGCAGTCGGCGCTGTCATCGCCGG
GACAACTCTCCGCCATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIAMILVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLTVWLLPLGWEWQGVLFAALTLLAAWLWWRWLARRVR
EQKPTDSRLNQRGQQLVGRRFMLDAALVNGRGHMRVGDSSWPVCADEDLRAGTHVEVIAVEGITLRIRAV

Sequences:

>Translated_150_residues
MIAMILVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLTVWLLPLGWEWQGVLFAALTLLAAWLWWRWLARRVR
EQKPTDSRLNQRGQQLVGRRFMLDAALVNGRGHMRVGDSSWPVCADEDLRAGTHVEVIAVEGITLRIRAV
>Mature_150_residues
MIAMILVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLTVWLLPLGWEWQGVLFAALTLLAAWLWWRWLARRVR
EQKPTDSRLNQRGQQLVGRRFMLDAALVNGRGHMRVGDSSWPVCADEDLRAGTHVEVIAVEGITLRIRAV

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=150, Percent_Identity=84, Blast_Score=237, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 16774; Mature: 16774

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAMILVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLTVWLLPLGWEWQGVLF
CEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHH
AALTLLAAWLWWRWLARRVREQKPTDSRLNQRGQQLVGRRFMLDAALVNGRGHMRVGDSS
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
WPVCADEDLRAGTHVEVIAVEGITLRIRAV
CCCCCCCCCCCCCEEEEEEECCEEEEEEEC
>Mature Secondary Structure
MIAMILVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLTVWLLPLGWEWQGVLF
CEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHH
AALTLLAAWLWWRWLARRVREQKPTDSRLNQRGQQLVGRRFMLDAALVNGRGHMRVGDSS
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
WPVCADEDLRAGTHVEVIAVEGITLRIRAV
CCCCCCCCCCCCCEEEEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]