Click here to switch to the map view.

The map label for this gene is ybbY [H]

Identifier: 29142729

GI number: 29142729

Start: 2401202

End: 2402500

Strand: Reverse

Name: ybbY [H]

Synonym: t2337

Alternate gene names: 29142729

Gene position: 2402500-2401202 (Counterclockwise)

Preceding gene: 29142730

Following gene: 29142728

Centisome position: 50.14

GC content: 51.5

Gene sequence:

>1299_bases
ATGTTCCCTGTTATTAACCGCGAAAGTGTATTGTCCGGCTTTCAGTGGTTTTTCTTTATTTTCTGTAACACGGTTGTGGT
TCCCCCTACCTTGCTGTCCGCTTTTCATCTTCCCGCTGATAACCTGTTAATGCTCACACAATACGCTTTTCTGACCACCG
CGTTGGCCTGCCTGGTTCAGGCATTTTGCGGCCATCGCCGCGCCATTATGGAAGGGCCGACAGGGTTGTGGTGGGGCGCT
ATACTTACGATTACGCTTGGCGAGGCGTCTCGCGGCACGCCGCTGAACGATATCGCCTCCAGCCTGTCGGTCGGGATCGC
GATCTCCGCGATGGTGACGATATTTATCGGCATTAGCGGCTTAGGACACCGTCTGGCTCGCCTGTTTACGCCGGCGGTAA
TGGTTTTTTTCATGCTGCTTTTGGGCGCGCAGCTGACCTCAATATTTTTTAAAGGCATGCTGGGGCTGCCTTTTGGCATT
GCCGATACCAGCGCCAGAATCAAATTGGCCCCCTTTGGGCTGGCGGTCGCGGTGATGTGTTTTATCCTCGCGATGATTAT
TTTCTTGCAGCAGCGTATCTCCCGTTACGCGTTACTGGTAGGGACCGTGGTCGGGTGGGGGCTATGGCGGTTATGCTTTC
CTTCGTCACACTTACCGCCGGGTGAATTAAGCTGGCGATGGTTTCCGCTGGGCAGCCACGGCACGCTGATGCCGGGTATT
ATTGTGACGGCGGTGATGACGGGGTTAGTCAACATCAGCAACACTTACGGCGCTATCCGCGGTACCGATATCTTTTATCC
GCATCAAGGGTCGGGCAGTTCTCGTTATCGCCGAAGCTTTATGATTTCCGGACTGATGACGTTAGTGACGGTGCCTTTTG
CGGTCGTGCCTTTTTCGCCTTTTGTATCTTCCATTGGTTTATTAACGCAAACCGGCGACAGTTCTCGCAAATCCTTTATC
TGCGGTAGCGCGCTGTGTCTGCTGGTTGCCATTATAACGCCGTTAACCCGCTTATTTTGCGCTATTCCACTGGCGATCAG
CAGCGCCGTTATGCTGGTCTCTTATTTACCTTTACTTTATTCCGGTTTGGTTTTTAGCCAGCAAATTACGTTTACCGCGC
GGAATATTTATCGCCTGGCGTTACCGCTTTTTGTCGGCATTTTTTTGATGGGGCTTCCTCCGGTCTATTTACAGGATCTT
CCACTGATGATTCGTCCTCTGCTTAGTAACGGATTACTGGTGGGAATCCTACTGGCAGTGCTTATGGAAAATCTTATTCC
GTGGGAACGCATTAAATAA

Upstream 100 bases:

>100_bases
GTGCCGCCAAAAGGTCAGTTTATCCTTAAACATCAGCAGTAATCCGGTGTGATTTAATGCCCGTCGTCACGACGGGCATT
CTCTATTTTAAGGTGTGGAT

Downstream 100 bases:

>100_bases
CGTGAGAAAACAAGGAGACATAATGAAGATTGTAATTGCGCCAGATTCATTTAAAGAGAGCTTAAGCGCTGATAAATGCT
GTCAGGCTATTAAAGCGGGA

Product: purine permease YbbY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MFPVINRESVLSGFQWFFFIFCNTVVVPPTLLSAFHLPADNLLMLTQYAFLTTALACLVQAFCGHRRAIMEGPTGLWWGA
ILTITLGEASRGTPLNDIASSLSVGIAISAMVTIFIGISGLGHRLARLFTPAVMVFFMLLLGAQLTSIFFKGMLGLPFGI
ADTSARIKLAPFGLAVAVMCFILAMIIFLQQRISRYALLVGTVVGWGLWRLCFPSSHLPPGELSWRWFPLGSHGTLMPGI
IVTAVMTGLVNISNTYGAIRGTDIFYPHQGSGSSRYRRSFMISGLMTLVTVPFAVVPFSPFVSSIGLLTQTGDSSRKSFI
CGSALCLLVAIITPLTRLFCAIPLAISSAVMLVSYLPLLYSGLVFSQQITFTARNIYRLALPLFVGIFLMGLPPVYLQDL
PLMIRPLLSNGLLVGILLAVLMENLIPWERIK

Sequences:

>Translated_432_residues
MFPVINRESVLSGFQWFFFIFCNTVVVPPTLLSAFHLPADNLLMLTQYAFLTTALACLVQAFCGHRRAIMEGPTGLWWGA
ILTITLGEASRGTPLNDIASSLSVGIAISAMVTIFIGISGLGHRLARLFTPAVMVFFMLLLGAQLTSIFFKGMLGLPFGI
ADTSARIKLAPFGLAVAVMCFILAMIIFLQQRISRYALLVGTVVGWGLWRLCFPSSHLPPGELSWRWFPLGSHGTLMPGI
IVTAVMTGLVNISNTYGAIRGTDIFYPHQGSGSSRYRRSFMISGLMTLVTVPFAVVPFSPFVSSIGLLTQTGDSSRKSFI
CGSALCLLVAIITPLTRLFCAIPLAISSAVMLVSYLPLLYSGLVFSQQITFTARNIYRLALPLFVGIFLMGLPPVYLQDL
PLMIRPLLSNGLLVGILLAVLMENLIPWERIK
>Mature_432_residues
MFPVINRESVLSGFQWFFFIFCNTVVVPPTLLSAFHLPADNLLMLTQYAFLTTALACLVQAFCGHRRAIMEGPTGLWWGA
ILTITLGEASRGTPLNDIASSLSVGIAISAMVTIFIGISGLGHRLARLFTPAVMVFFMLLLGAQLTSIFFKGMLGLPFGI
ADTSARIKLAPFGLAVAVMCFILAMIIFLQQRISRYALLVGTVVGWGLWRLCFPSSHLPPGELSWRWFPLGSHGTLMPGI
IVTAVMTGLVNISNTYGAIRGTDIFYPHQGSGSSRYRRSFMISGLMTLVTVPFAVVPFSPFVSSIGLLTQTGDSSRKSFI
CGSALCLLVAIITPLTRLFCAIPLAISSAVMLVSYLPLLYSGLVFSQQITFTARNIYRLALPLFVGIFLMGLPPVYLQDL
PLMIRPLLSNGLLVGILLAVLMENLIPWERIK

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081750, Length=428, Percent_Identity=79.4392523364486, Blast_Score=691, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 47070; Mature: 47070

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPVINRESVLSGFQWFFFIFCNTVVVPPTLLSAFHLPADNLLMLTQYAFLTTALACLVQ
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AFCGHRRAIMEGPTGLWWGAILTITLGEASRGTPLNDIASSLSVGIAISAMVTIFIGISG
HHHCCCHHHHCCCCCHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGHRLARLFTPAVMVFFMLLLGAQLTSIFFKGMLGLPFGIADTSARIKLAPFGLAVAVMC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHH
FILAMIIFLQQRISRYALLVGTVVGWGLWRLCFPSSHLPPGELSWRWFPLGSHGTLMPGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHH
IVTAVMTGLVNISNTYGAIRGTDIFYPHQGSGSSRYRRSFMISGLMTLVTVPFAVVPFSP
HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
FVSSIGLLTQTGDSSRKSFICGSALCLLVAIITPLTRLFCAIPLAISSAVMLVSYLPLLY
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLVFSQQITFTARNIYRLALPLFVGIFLMGLPPVYLQDLPLMIRPLLSNGLLVGILLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCHHHHHHHHH
LMENLIPWERIK
HHHHCCCHHCCC
>Mature Secondary Structure
MFPVINRESVLSGFQWFFFIFCNTVVVPPTLLSAFHLPADNLLMLTQYAFLTTALACLVQ
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AFCGHRRAIMEGPTGLWWGAILTITLGEASRGTPLNDIASSLSVGIAISAMVTIFIGISG
HHHCCCHHHHCCCCCHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGHRLARLFTPAVMVFFMLLLGAQLTSIFFKGMLGLPFGIADTSARIKLAPFGLAVAVMC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHH
FILAMIIFLQQRISRYALLVGTVVGWGLWRLCFPSSHLPPGELSWRWFPLGSHGTLMPGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHH
IVTAVMTGLVNISNTYGAIRGTDIFYPHQGSGSSRYRRSFMISGLMTLVTVPFAVVPFSP
HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
FVSSIGLLTQTGDSSRKSFICGSALCLLVAIITPLTRLFCAIPLAISSAVMLVSYLPLLY
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLVFSQQITFTARNIYRLALPLFVGIFLMGLPPVYLQDLPLMIRPLLSNGLLVGILLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCHHHHHHHHH
LMENLIPWERIK
HHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]