| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is glxK [H]
Identifier: 29142728
GI number: 29142728
Start: 2400031
End: 2401179
Strand: Reverse
Name: glxK [H]
Synonym: t2336
Alternate gene names: 29142728
Gene position: 2401179-2400031 (Counterclockwise)
Preceding gene: 29142729
Following gene: 29142724
Centisome position: 50.11
GC content: 57.35
Gene sequence:
>1149_bases ATGAAGATTGTAATTGCGCCAGATTCATTTAAAGAGAGCTTAAGCGCTGATAAATGCTGTCAGGCTATTAAAGCGGGATT TTCAACCGTATTTCCGGATGCGCGCTATGTTTGTTTACCGATCGCCGATGGTGGAGAAGGAACCGTGGATGCGATGGTGG CTGCGACCGGCGGGAAACGGGTTTCTGTGGACGTTAGCGGGCCGATGGGGGAAAAAGTAAACGGATTTTATGGCCTGACC GGCGACGGCAAAACGGCGATTATTGAAATGGCGGCGGCGAGCGGATTGATGCTGGTGGCGCCCGAGGCGCGTAATCCGCT GCGGGCATCCAGTTTCGGCACAGGCGAATTGATTCGTCACGCCCTGGACGCGGGAATTCGCCATATTATTCTGGGTATCG GCGGCAGCGCCACGGTGGATGGCGGAATGGGAGTAGCGCAGGCGCTCGGTGTGCGTTTTCTGGACGCGCAGGGAACGCCG CTTGGCGCCGAAGGGGGCAATTTATCGCGCCTGGCGAGCATTGACCTGCAGGGGCGCGATCCGCGAATTTCAGAGTGTCG TATTGAGGTCGCCTGTGATGTTGATAACCCGTTGGTGGGGCCACGCGGCGCGGCGGCGGTATTCGGTCCGCAGAAAGGGG CGACGCCTGAAATGGTCGAGACGCTGGAAAATGGATTGCGTAATTATGCCCGTATTTTACATGCCCTGACCGGACGCGAC ATGTCTCAAATACCGGGCGGTGGAGCGGCCGGAGGAATGGGGATTGCCGCTATCGTCTTCCTGGAAGCGGAAATGAAGCC CGGTATTGAGATTGTTATGCAGGCGGTGAAGCTGGAGGAGGCGGTAAAAGAGGCCTCGCTGGTGATTACCGGAGAAGGGC GAATCGACTCGCAAACGGCGGGAGGAAAAGCGCCGATAGGCGTCGCATCAGTGGCGAAACGGCATCATGTCCCGGTTATC GGCATTGCCGGCGTATTGGGCGACGGCGTGGAAGTGGTCCATCGTCACGGTATTGATGCAGTATTCAGTATTTTGCCGCG GCTGGCGCCTTTGCCGGAGGTTCTGGCGAACGGTGAACAAAATCTCTACCACAGCGCCTGTAATATTGCCCGCGTCATCA AACTTGGCCAGGACATCGGGACTCGTTAA
Upstream 100 bases:
>100_bases CTTAGTAACGGATTACTGGTGGGAATCCTACTGGCAGTGCTTATGGAAAATCTTATTCCGTGGGAACGCATTAAATAACG TGAGAAAACAAGGAGACATA
Downstream 100 bases:
>100_bases GTATAAAAAAATCCACGGTTCTCACCGTGGCAAAATCCAACATAGCTAAATAAAAATAATCAGGAGGGCTGCCCGCCGTT AAATCATAACGTCGCGGTTA
Product: glycerate kinase II
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKIVIAPDSFKESLSADKCCQAIKAGFSTVFPDARYVCLPIADGGEGTVDAMVAATGGKRVSVDVSGPMGEKVNGFYGLT GDGKTAIIEMAAASGLMLVAPEARNPLRASSFGTGELIRHALDAGIRHIILGIGGSATVDGGMGVAQALGVRFLDAQGTP LGAEGGNLSRLASIDLQGRDPRISECRIEVACDVDNPLVGPRGAAAVFGPQKGATPEMVETLENGLRNYARILHALTGRD MSQIPGGGAAGGMGIAAIVFLEAEMKPGIEIVMQAVKLEEAVKEASLVITGEGRIDSQTAGGKAPIGVASVAKRHHVPVI GIAGVLGDGVEVVHRHGIDAVFSILPRLAPLPEVLANGEQNLYHSACNIARVIKLGQDIGTR
Sequences:
>Translated_382_residues MKIVIAPDSFKESLSADKCCQAIKAGFSTVFPDARYVCLPIADGGEGTVDAMVAATGGKRVSVDVSGPMGEKVNGFYGLT GDGKTAIIEMAAASGLMLVAPEARNPLRASSFGTGELIRHALDAGIRHIILGIGGSATVDGGMGVAQALGVRFLDAQGTP LGAEGGNLSRLASIDLQGRDPRISECRIEVACDVDNPLVGPRGAAAVFGPQKGATPEMVETLENGLRNYARILHALTGRD MSQIPGGGAAGGMGIAAIVFLEAEMKPGIEIVMQAVKLEEAVKEASLVITGEGRIDSQTAGGKAPIGVASVAKRHHVPVI GIAGVLGDGVEVVHRHGIDAVFSILPRLAPLPEVLANGEQNLYHSACNIARVIKLGQDIGTR >Mature_382_residues MKIVIAPDSFKESLSADKCCQAIKAGFSTVFPDARYVCLPIADGGEGTVDAMVAATGGKRVSVDVSGPMGEKVNGFYGLT GDGKTAIIEMAAASGLMLVAPEARNPLRASSFGTGELIRHALDAGIRHIILGIGGSATVDGGMGVAQALGVRFLDAQGTP LGAEGGNLSRLASIDLQGRDPRISECRIEVACDVDNPLVGPRGAAAVFGPQKGATPEMVETLENGLRNYARILHALTGRD MSQIPGGGAAGGMGIAAIVFLEAEMKPGIEIVMQAVKLEEAVKEASLVITGEGRIDSQTAGGKAPIGVASVAKRHHVPVI GIAGVLGDGVEVVHRHGIDAVFSILPRLAPLPEVLANGEQNLYHSACNIARVIKLGQDIGTR
Specific function: Glyoxylate catabolism. [C]
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI1786724, Length=379, Percent_Identity=79.9472295514512, Blast_Score=574, Evalue=1e-165, Organism=Escherichia coli, GI145693185, Length=376, Percent_Identity=57.4468085106383, Blast_Score=402, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 39204; Mature: 39204
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVIAPDSFKESLSADKCCQAIKAGFSTVFPDARYVCLPIADGGEGTVDAMVAATGGKR CEEEECCCHHHHHCCHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCE VSVDVSGPMGEKVNGFYGLTGDGKTAIIEMAAASGLMLVAPEARNPLRASSFGTGELIRH EEEEECCCCCCCCCCEEEECCCCCEEEEEEHHHCCEEEEECCCCCCCCCCCCCHHHHHHH ALDAGIRHIILGIGGSATVDGGMGVAQALGVRFLDAQGTPLGAEGGNLSRLASIDLQGRD HHHHCCCEEEEECCCCCEECCCCHHHHHHCEEEECCCCCCCCCCCCCCEEEEEEECCCCC PRISECRIEVACDVDNPLVGPRGAAAVFGPQKGATPEMVETLENGLRNYARILHALTGRD CCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC MSQIPGGGAAGGMGIAAIVFLEAEMKPGIEIVMQAVKLEEAVKEASLVITGEGRIDSQTA HHHCCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC GGKAPIGVASVAKRHHVPVIGIAGVLGDGVEVVHRHGIDAVFSILPRLAPLPEVLANGEQ CCCCCCCHHHHHHHCCCCEEEEHHHHCCHHHHHHHCCHHHHHHHHHHCCCCHHHHCCCCH NLYHSACNIARVIKLGQDIGTR HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIVIAPDSFKESLSADKCCQAIKAGFSTVFPDARYVCLPIADGGEGTVDAMVAATGGKR CEEEECCCHHHHHCCHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCE VSVDVSGPMGEKVNGFYGLTGDGKTAIIEMAAASGLMLVAPEARNPLRASSFGTGELIRH EEEEECCCCCCCCCCEEEECCCCCEEEEEEHHHCCEEEEECCCCCCCCCCCCCHHHHHHH ALDAGIRHIILGIGGSATVDGGMGVAQALGVRFLDAQGTPLGAEGGNLSRLASIDLQGRD HHHHCCCEEEEECCCCCEECCCCHHHHHHCEEEECCCCCCCCCCCCCCEEEEEEECCCCC PRISECRIEVACDVDNPLVGPRGAAAVFGPQKGATPEMVETLENGLRNYARILHALTGRD CCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC MSQIPGGGAAGGMGIAAIVFLEAEMKPGIEIVMQAVKLEEAVKEASLVITGEGRIDSQTA HHHCCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC GGKAPIGVASVAKRHHVPVIGIAGVLGDGVEVVHRHGIDAVFSILPRLAPLPEVLANGEQ CCCCCCCHHHHHHHCCCCEEEEHHHHCCHHHHHHHCCHHHHHHHHHHCCCCHHHHCCCCH NLYHSACNIARVIKLGQDIGTR HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10601204; 9278503 [H]