Click here to switch to the map view.

The map label for this gene is fimI

Identifier: 29142711

GI number: 29142711

Start: 2383862

End: 2384395

Strand: Reverse

Name: fimI

Synonym: t2319

Alternate gene names: 29142711

Gene position: 2384395-2383862 (Counterclockwise)

Preceding gene: 29142712

Following gene: 29142710

Centisome position: 49.76

GC content: 54.49

Gene sequence:

>534_bases
ATGATAAGGAAAGGCGCGGCGCTAGTGGGGCTTGTTTTGATGTCGCCCGTCATTGCGCAGCCGGTAATGGTAGAGAGCGG
GCGTGTTCACCTGCGCGGACAACTGGTCAATGGCGGCTGCGCTGTCGCCACTGAAAGCCAGGATTTGCGCGTACTGATGG
GACAGTACCGCACGAATGCGTTTACCGGTCCTGGCAGCTTCGCTCCCGTCAGCGTTCCATTTTCGTTACGGTTAATCTCC
TGTAGCGCGGAGGTCTGGCGTCATGTCGGCATTGCGTTTGCCGGCGTTACGCCTGCGGAAGATCCCCATGTTTTTCTGGC
CAGCGGCGAAGGTATCGGTAATGCCGGAATCGGCCTGGCGTTATTTGATGACCAGCAGCGGCAAATCATACCTAACACGT
TACCGCTTCATTACGCGCCCATTTTAACGTCAGAAATGACTTTGCATTTTACCGCCCGCTATCGGGCAATTTCAGAAAAT
ATGACGCCGGGACGAATTCATTCAGAAGTGTGGTTTACGCTGGTTTACCCATGA

Upstream 100 bases:

>100_bases
CCACCTTTATCATGAAATACGAATAATCCCGTCAGGGAACGCCAGGGAAGGGAGGCGTCTCAACGGAAGAGGCTATCGGG
GATAAAAGAGAACATAGCAG

Downstream 100 bases:

>100_bases
ATTTTCTTGCCGACGTGACTCAATGCAAAAGGTATTTTTTACCATGCTGAATAGTATAAAATTAGGATTTATTGTTCTTC
TCACGTTATTTACTTCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MIRKGAALVGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLIS
CSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYAPILTSEMTLHFTARYRAISEN
MTPGRIHSEVWFTLVYP

Sequences:

>Translated_177_residues
MIRKGAALVGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLIS
CSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYAPILTSEMTLHFTARYRAISEN
MTPGRIHSEVWFTLVYP
>Mature_177_residues
MIRKGAALVGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPVSVPFSLRLIS
CSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLALFDDQQRQIIPNTLPLHYAPILTSEMTLHFTARYRAISEN
MTPGRIHSEVWFTLVYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family

Homologues:

Organism=Escherichia coli, GI87082421, Length=151, Percent_Identity=35.0993377483444, Blast_Score=91, Evalue=3e-20,
Organism=Escherichia coli, GI87081753, Length=158, Percent_Identity=28.4810126582279, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1790773, Length=157, Percent_Identity=28.6624203821656, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FIMI_SALTI (Q08456)

Other databases:

- EMBL:   X74064
- EMBL:   AL627267
- EMBL:   AE014613
- PIR:   S34658
- RefSeq:   NP_806053.1
- ProteinModelPortal:   Q08456
- GeneID:   1069423
- GenomeReviews:   AE014613_GR
- KEGG:   stt:t2319
- HOGENOM:   HBG701898
- OMA:   PILTQEM
- ProtClustDB:   PRK15200
- BioCyc:   SENT209261:T2319-MONOMER
- GO:   GO:0009289
- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- Gene3D:   G3DSA:2.60.40.1090

Pfam domain/function: PF00419 Fimbrial; SSF49401 Adhes_bact

EC number: NA

Molecular weight: Translated: 19097; Mature: 19097

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKGAALVGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNA
CCCCCHHHHHHHHHHHHHCCCEEECCCCEEEEEEEECCCEEEEECCCCHHEEEHHHCCCE
FTGPGSFAPVSVPFSLRLISCSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLA
ECCCCCCCEEECCEEEEEEEECHHHHHHHCEEEECCCCCCCCEEEEEECCCCCCCCEEEE
LFDDQQRQIIPNTLPLHYAPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVYP
EECCCCCEECCCCCCEEEECEEECCEEEEEEEEEEECCCCCCCCEEECEEEEEEECC
>Mature Secondary Structure
MIRKGAALVGLVLMSPVIAQPVMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNA
CCCCCHHHHHHHHHHHHHCCCEEECCCCEEEEEEEECCCEEEEECCCCHHEEEHHHCCCE
FTGPGSFAPVSVPFSLRLISCSAEVWRHVGIAFAGVTPAEDPHVFLASGEGIGNAGIGLA
ECCCCCCCEEECCEEEEEEEECHHHHHHHCEEEECCCCCCCCEEEEEECCCCCCCCEEEE
LFDDQQRQIIPNTLPLHYAPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVYP
EECCCCCEECCCCCCEEEECEEECCEEEEEEEEEEECCCCCCCCEEECEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8288102; 11677608; 12644504